RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 METTL15P1P0C7V9 234 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 S100A11P31949 105 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 TMEM267Q0VDI3 215 aaPredicted RBP12.23□□□□□ -0.45
UPF1-206ENST00000598471 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
UPF1-206ENST00000598471 TMEM14EPQ6UXP3 125 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 HSPB9Q9BQS6 159 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
UPF1-206ENST00000598471 A0A1B0GW64 132 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 C15orf62A8K5M9 175 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 TAAR5O14804 337 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 CYB5BO43169 146 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 TSPAN9O75954 239 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 CST7O76096 145 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 AMY1AP04745 511 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 IFNA4P05014 189 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 NDPQ00604 133 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 WT1-ASQ06250 92 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 C2orf83Q53S99 150 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 TMUB2Q71RG4 321 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 SLC35E3Q7Z769 313 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 ZNF114Q8NC26 417 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 OR10P1Q8NGE3 313 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 OR1S2Q8NGQ3 325 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 SGMS2Q8NHU3 365 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 PINX1Q96BK5 328 aaKnown RBP12.22□□□□□ -0.45
UPF1-206ENST00000598471 JMJD8Q96S16 334 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 FAM103A1Q9BTL3 118 aaKnown RBP12.22□□□□□ -0.45
UPF1-206ENST00000598471 HIVEP2P31629 2446 aa12.22□□□□□ -0.45
UPF1-206ENST00000598471 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 SH2D7A6NKC9 451 aaPredicted RBP12.21□□□□□ -0.45
UPF1-206ENST00000598471 ATP6V0E1O15342 81 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 BCL2L11O43521 198 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 IGHG2P01859 326 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
UPF1-206ENST00000598471 AREGP15514 252 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 BSXQ3C1V8 233 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.45
UPF1-206ENST00000598471 LAMTOR1Q6IAA8 161 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 OR8G2PQ6IF36 304 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 ETV3LQ6ZN32 361 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 LILRB2Q8N423 598 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 ARPC5LQ9BPX5 153 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 PRSS22Q9GZN4 317 aa12.21□□□□□ -0.45
UPF1-206ENST00000598471 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.46
UPF1-206ENST00000598471 TNCP24821 2201 aa12.21□□□□□ -0.46
UPF1-206ENST00000598471 NPIPB5A8MRT5 1133 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 CLDN34H7C241 214 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 TRIM77I1YAP6 450 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 REG1AP05451 166 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 FAM157CP0CG43 387 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 APELAP0DMC3 54 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 DEFA4P12838 97 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 NHLH2Q02577 135 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 OPCMLQ14982 345 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 ECSCRQ19T08 205 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 UNQ5815/PRO19632Q6UWF5 114 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 STPG2Q8N412 459 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 LFNGQ8NES3 379 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 OR1P1Q8NH06 330 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 P2RX4Q99571 388 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 FBXL17Q9UF56 701 aa12.2□□□□□ -0.46
UPF1-206ENST00000598471 F11RQ9Y624 299 aaKnown RBP12.2□□□□□ -0.46
UPF1-206ENST00000598471 AP4M1O00189 453 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 CORTO00230 105 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 DFFBO76075 338 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 CTRB1P17538 263 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 CRIP2P52943 208 aaPredicted RBP12.19□□□□□ -0.46
UPF1-206ENST00000598471 BLCAPP62952 87 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 AKIRIN2Q53H80 203 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 CTRB2Q6GPI1 263 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 TTC9CQ8N5M4 171 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 RNASEH2CQ8TDP1 164 aaKnown RBP12.19□□□□□ -0.46
UPF1-206ENST00000598471 DUX5Q96PT3 197 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 SMIM3Q9BZL3 60 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
UPF1-206ENST00000598471 SONP18583 2426 aaKnown RBP12.19□□□□□ -0.46
UPF1-206ENST00000598471 BORCS7-ASMTA0A0B4J1R7 106 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 TRAV41A0A0B4J266 112 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 FBXO24O75426 580 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 IGF1P05019 195 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 CRYGCP07315 174 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
UPF1-206ENST00000598471 HILS1P60008 231 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 RPL15P61313 204 aaKnown RBP12.18□□□□□ -0.46
UPF1-206ENST00000598471 EIF5AP63241 154 aaKnown RBP12.18□□□□□ -0.46
UPF1-206ENST00000598471 ZNF266Q14584 549 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 CLINT1Q14677 625 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
UPF1-206ENST00000598471 ATP5SQ99766 215 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
UPF1-206ENST00000598471 RPS10-NUDT3A0A1W2PQS6 291 aa12.17□□□□□ -0.46
UPF1-206ENST00000598471 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms