RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 BRI3O95415 125 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 IL6RP08887 468 aaPredicted RBP10.51□□□□□ -0.73
SCAF1-203ENST00000598359 ZP3P21754 424 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 SUPT4H1P63272 117 aaKnown RBP10.51□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF66Q6ZN08 573 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 PUSL1Q8N0Z8 303 aaKnown RBP10.51□□□□□ -0.73
SCAF1-203ENST00000598359 WDR89Q96FK6 387 aaPredicted RBP10.51□□□□□ -0.73
SCAF1-203ENST00000598359 SPIN2AQ99865 258 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 SPIN2BQ9BPZ2 258 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
SCAF1-203ENST00000598359 ELOVL1Q9BW60 279 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 U3KQK5 164 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 HUWE1Q7Z6Z7 4374 aaKnown RBP10.51□□□□□ -0.73
SCAF1-203ENST00000598359 RYR2Q92736 4967 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 OR2J3O76001 311 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 SIX6O95475 246 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 IGLV1-51P01701 117 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 NHLRC4P0CG21 123 aaPredicted RBP10.5□□□□□ -0.73
SCAF1-203ENST00000598359 AKR1C4P17516 323 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 C4BPBP20851 252 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 FGL1Q08830 312 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 EXOSC2Q13868 293 aaKnown RBP10.5□□□□□ -0.73
SCAF1-203ENST00000598359 IL34Q6ZMJ4 242 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF818PQ6ZRF7 136 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 SBSPONQ8IVN8 264 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 TMEM167AQ8TBQ9 72 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 MOB3AQ96BX8 217 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
SCAF1-203ENST00000598359 C14orf166Q9Y224 244 aaKnown RBP10.5□□□□□ -0.73
SCAF1-203ENST00000598359 SORL1Q92673 2214 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 TRBV9A0A0B4J1U6 114 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 BMPR1BO00238 502 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 REG1AP05451 166 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 FRMD6-AS1P0C7T7 363 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 SLC25A4P12235 298 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 AREGP15514 252 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 RPA2P15927 270 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 VAMP1P23763 118 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 RPL27AP46776 148 aaKnown RBP10.49□□□□□ -0.73
SCAF1-203ENST00000598359 ATP5G2Q06055 141 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 RPEL1Q2QD12 228 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 TTC9CQ8N5M4 171 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 OR51H1Q8NH63 302 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 S4R3C0 116 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 STAB2Q8WWQ8 2551 aa10.49□□□□□ -0.73
SCAF1-203ENST00000598359 TRAV3A0A0B4J244 114 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 CRYM-AS1A6NIL9 109 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 PPP5D1E7EU14 171 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 CSN3P07498 182 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 PGAM2P15259 253 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 CXCL2P19875 107 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 OR4A47Q6IF82 309 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 GALNT14Q96FL9 552 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 KRTAP17-1Q9BYP8 105 aa10.48□□□□□ -0.73
SCAF1-203ENST00000598359 IZUMO1RA6ND01 250 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 CGB1A6NKQ9 187 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 FAM223BA6NKX1 122 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 NDUFB8O95169 186 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 HRASP01112 189 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 EDN2P20800 178 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 HERV-K104P61576 105 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 RPL8P62917 257 aaKnown RBP10.47□□□□□ -0.73
SCAF1-203ENST00000598359 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
SCAF1-203ENST00000598359 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 ANKRD55Q3KP44 614 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 FAM223AQ8IWN6 122 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 Q8N1Y9 231 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 NECAP1Q8NC96 275 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 VSTM2AQ8TAG5 236 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 NMES1Q9C002 83 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 FBXL7Q9UJT9 491 aa10.47□□□□□ -0.73
SCAF1-203ENST00000598359 L7N2F9 121 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 CCSO14618 274 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 S1PR2O95136 353 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 PI3P19957 117 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 GNRHRP30968 328 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 RND3P61587 244 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF345Q14585 488 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 OPCMLQ14982 345 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 MSMO1Q15800 293 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 TEX261Q6UWH6 196 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 GSG1LQ6UXU4 331 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 ADAMTSL5Q6ZMM2 481 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 SGPP2Q8IWX5 399 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 LRTM2Q8N967 370 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 ZBTB34Q8NCN2 500 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 FANCD2OSQ96PS1 177 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 SLC2A9Q9NRM0 540 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF257Q9Y2Q1 563 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 SELENOKQ9Y6D0 94 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 U3KQ87 197 aa10.46□□□□□ -0.73
SCAF1-203ENST00000598359 DYNC2H1Q8NCM8 4307 aaKnown RBP10.45□□□□□ -0.74
SCAF1-203ENST00000598359 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms