RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ANKRD34BA5PLL1 514 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 RBMXL2O75526 392 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 OR2J3O76001 311 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 IGKV1-39P01597 117 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 IGKV1D-39P04432 117 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 AREGP15514 252 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 UCP1P25874 307 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 AKR1C2P52895 323 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 ZNF45Q02386 682 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 RRNAD1Q96FB5 475 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 SRRQ9GZT4 340 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 THYN1Q9P016 225 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 FBXL7Q9UJT9 491 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
SHKBP1-203ENST00000594298 TNCP24821 2201 aa13.33□□□□□ -0.27
SHKBP1-203ENST00000594298 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 CGB1A6NKQ9 187 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 SYNJ2BPP57105 145 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 HAGHQ16775 308 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 KLK9Q2XQG4 91 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 SP6Q3SY56 376 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 TMEM222Q9H0R3 208 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 TMEM14BQ9NUH8 114 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 KLK9Q9UKQ9 250 aa13.33□□□□□ -0.28
SHKBP1-203ENST00000594298 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 REG1AP05451 166 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 OR5AC1P0C628 307 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 OR13C7P0DN81 318 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 C15orf32Q32M92 178 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 LCN12Q6JVE5 192 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 SLC25A21Q9BQT8 299 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-203ENST00000594298 PIGBOS1A0A0B4J2F0 54 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 NAP1L6A6NFF2 107 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 CDS2O95674 445 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 CSN3P07498 182 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 ANXA3P12429 323 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 HSPE1P61604 102 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 DEFA5Q01523 94 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 OR10W1Q8NGF6 305 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 GLYATL2Q8WU03 294 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 EEF1AKMT3Q96AZ1 226 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 CXorf58Q96LI9 332 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 LYSTQ99698 3801 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 PDCD10Q9BUL8 212 aa13.31□□□□□ -0.28
SHKBP1-203ENST00000594298 IGLV11-55A0A075B6I3 123 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 CENPXA8MT69 81 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 IGKV1-5P01602 117 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 AKR1C4P17516 323 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 ADAMTSL5Q6ZMM2 481 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 LINC00299Q6ZSB3 139 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 RBPMSQ93062 196 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 GALNT14Q96FL9 552 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 TUBA4BQ9H853 241 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 CSMD3Q7Z407 3707 aa13.3□□□□□ -0.28
SHKBP1-203ENST00000594298 TRBV7-1A0A0A6YYK4 115 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 A6NHS1 94 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 NDUFB8O95169 186 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 SRPXP78539 464 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 ERHP84090 104 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 WT1-ASQ06250 92 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 BAK1Q16611 211 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 SLC25A24Q6NUK1 477 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
SHKBP1-203ENST00000594298 IFNA17P01571 189 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 P0C879 139 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 TMEM268Q5VZI3 342 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 LINC00322Q6ZN03 302 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 C19orf35Q6ZS72 473 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 SELENOHQ8IZQ5 122 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 C7orf50Q9BRJ6 194 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 PLEKHA3Q9HB20 300 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 PEMTQ9UBM1 199 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 CACFD1Q9UGQ2 172 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 F11RQ9Y624 299 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 TMEM56-RWDD3S4R434 201 aa13.28□□□□□ -0.28
SHKBP1-203ENST00000594298 A0A0B4J293 547 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 TMEM187Q14656 261 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 TMED4Q7Z7H5 227 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms