RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 F11RQ9Y624 299 aaKnown RBP6.29□□□□□ -1.4
SMAD4-215ENST00000592911 TRAV14DV4A0A0A6YYC5 116 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 IGHV4-28A0A0C4DH34 117 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 TMEM189A5PLL7 270 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 RAB27BO00194 218 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 UPK2O00526 184 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 IFNA10P01566 189 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 EIF4EP06730 217 aaKnown RBP6.28□□□□□ -1.4
SMAD4-215ENST00000592911 RBMY1A1P0DJD3 496 aaKnown RBP6.28□□□□□ -1.4
SMAD4-215ENST00000592911 RBMY1CP0DJD4 496 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 RBMY1FQ15415 496 aaKnown RBP6.28□□□□□ -1.4
SMAD4-215ENST00000592911 SPHARQ15513 63 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 C2orf76Q3KRA6 126 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 Q6ZRM9 215 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 VKORC1L1Q8N0U8 176 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 OR1L8Q8NGR8 309 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 SCARB1Q8WTV0 552 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 UFD1Q92890 307 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 LSM10Q969L4 123 aaKnown RBP6.28□□□□□ -1.4
SMAD4-215ENST00000592911 C20orf24Q9BUV8 137 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 C1QTNF4Q9BXJ3 329 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 RNF167Q9H6Y7 350 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 VSIRQ9H7M9 311 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 PLEKHA2Q9HB19 425 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 TMEM14BQ9NUH8 114 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 FKBP14Q9NWM8 211 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 S4R3C0 116 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 V9GY05 133 aa6.28□□□□□ -1.4
SMAD4-215ENST00000592911 IGHV3-35A0A0C4DH35 117 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 TMEM272A0A1B0GTI8 110 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 CTSGP08311 255 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 TRAPPC2P0DI81 140 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 TRAPPC2BP0DI82 140 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 BRWD1-AS2P59051 145 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 RCN1Q15293 331 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 C19orf35Q6ZS72 473 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF367Q7RTV3 350 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 TRPT1Q86TN4 253 aaKnown RBP6.27□□□□□ -1.41
SMAD4-215ENST00000592911 IQCF2Q8IXL9 164 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 MAPKAPK5-AS1Q8N8E1 139 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 OR1P1Q8NH06 330 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 NEU1Q99519 415 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 GFI1Q99684 422 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 ARPC5LQ9BPX5 153 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 CHRDL1Q9BU40 450 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 HRASLSQ9HDD0 168 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 FKBP11Q9NYL4 201 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 TBC1D24Q9ULP9 559 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 SELENOKQ9Y6D0 94 aa6.27□□□□□ -1.41
SMAD4-215ENST00000592911 A0A1W2PS18 150 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 NOTOA8MTQ0 251 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 C16orf90A8MZG2 172 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 K7EIM0 57 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 DNASE2O00115 360 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-215ENST00000592911 PDCD5O14737 125 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 REG1AP05451 166 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 RPA2P15927 270 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 GNB3P16520 340 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 NUTF2P61970 127 aaKnown RBP6.26□□□□□ -1.41
SMAD4-215ENST00000592911 INSL4Q14641 139 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 OXA1LQ15070 435 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 SLC25A24Q6NUK1 477 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 AHSA2Q719I0 299 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 C8orf59Q8N0T1 100 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-215ENST00000592911 SPAG16Q8N0X2 631 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 DHRSXQ8N5I4 330 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF414Q96IQ9 312 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 TMEM56Q96MV1 263 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 CCDC90BQ9GZT6 254 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 NXF2Q9GZY0 626 aaKnown RBP6.26□□□□□ -1.41
SMAD4-215ENST00000592911 SEPSECSQ9HD40 501 aaKnown RBP6.26□□□□□ -1.41
SMAD4-215ENST00000592911 ACOT13Q9NPJ3 140 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 NDUFA4L2Q9NRX3 87 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 LSM2Q9Y333 95 aaKnown RBP6.26□□□□□ -1.41
SMAD4-215ENST00000592911 X6R8D5 127 aa6.26□□□□□ -1.41
SMAD4-215ENST00000592911 TRAV1-2A0A0B4J238 106 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 SMIM31A0A1B0GVY4 71 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 SMIM9A6NGZ8 99 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 DEFB4AO15263 64 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 GIG44P09565 113 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-215ENST00000592911 OR13C7P0DN81 318 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 S100A1P23297 94 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 FGF9P31371 208 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-215ENST00000592911 HOXA1P49639 335 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-215ENST00000592911 MFAP4P55083 255 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 DEFB131AP59861 70 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 ERVK-16P61578 105 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 WT1-ASQ06250 92 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 Q56UQ5 140 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 OR2B11Q5JQS5 317 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 HACD4Q5VWC8 232 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 TCF24Q7RTU0 167 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 CROCCP3Q8IVE0 287 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 UBE2DNLQ8IWF7 75 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 ZNF114Q8NC26 417 aa6.25□□□□□ -1.41
SMAD4-215ENST00000592911 CSNK1G2-AS1Q8NCQ2 148 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms