RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GPR107Q5VW38 600 aa12.86□□□□□ -0.35
RETREG3-210ENST00000590541 PRNDQ9UKY0 176 aa12.86□□□□□ -0.35
RETREG3-210ENST00000590541 TRAV3A0A0B4J244 114 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 KRASP01116 189 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 PTBP1P26599 531 aaKnown RBP eCLIP12.85□□□□□ -0.35
RETREG3-210ENST00000590541 ZNF585BQ52M93 769 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 GPR141Q7Z602 305 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 OR1L6Q8NGR2 347 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 LSM10Q969L4 123 aaKnown RBP12.85□□□□□ -0.35
RETREG3-210ENST00000590541 CCDC140Q96MF4 163 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 ATP6V0BQ99437 205 aa12.85□□□□□ -0.35
RETREG3-210ENST00000590541 ABCA13Q86UQ4 5058 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 REG1AP05451 166 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 SERPINE2P07093 398 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 MYOD1P15172 320 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 RNASE10Q5GAN6 216 aaKnown RBP12.84□□□□□ -0.35
RETREG3-210ENST00000590541 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 UXS1Q8NBZ7 420 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 ZNF486Q96H40 463 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-210ENST00000590541 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 NAA50Q9GZZ1 169 aaKnown RBP12.84□□□□□ -0.35
RETREG3-210ENST00000590541 NDUFA4L2Q9NRX3 87 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 DNAH6Q9C0G6 4158 aa12.84□□□□□ -0.35
RETREG3-210ENST00000590541 A8MWP6 167 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 RPA2P15927 270 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 G6PCP35575 357 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 ALDH3B2P48448 385 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 APOC4P55056 127 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 TBC1D26Q86UD7 250 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 RNF183Q96D59 192 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 BCL7BQ9BQE9 202 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
RETREG3-210ENST00000590541 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 MTFP1Q9UDX5 166 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 RABL2BQ9UNT1 228 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 OR51B2Q9Y5P1 312 aa12.83□□□□□ -0.36
RETREG3-210ENST00000590541 CLEC3BP05452 202 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 OR13C7P0DN81 318 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 RND3P61587 244 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 MRPS10P82664 201 aaKnown RBP12.82□□□□□ -0.36
RETREG3-210ENST00000590541 SSBP1Q04837 148 aaKnown RBP12.82□□□□□ -0.36
RETREG3-210ENST00000590541 BTNL8Q6UX41 500 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 TMEM217Q8N7C4 229 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 OR10W1Q8NGF6 305 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 ZNF502Q8TBZ5 544 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 MARC2Q969Z3 335 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 TMEM14BQ9NUH8 114 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 KLK11Q9UBX7 282 aa12.82□□□□□ -0.36
RETREG3-210ENST00000590541 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 MFSD2BA6NFX1 497 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 UBE2CO00762 179 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 ELLP55199 621 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-210ENST00000590541 WT1-ASQ06250 92 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 H2BFWTQ7Z2G1 175 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 OR52I2Q8NH67 350 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 RAB2BQ8WUD1 216 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 SEC22AQ96IW7 307 aa12.81□□□□□ -0.36
RETREG3-210ENST00000590541 F11RQ9Y624 299 aaKnown RBP12.81□□□□□ -0.36
RETREG3-210ENST00000590541 ZNF320A2RRD8 509 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 C15orf61A6NNL5 157 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 M0QYG6 137 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 ATG12O94817 140 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 TAS2R19P59542 299 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 SLC25A24Q6NUK1 477 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 SPSB3Q6PJ21 355 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 PLET1Q6UQ28 207 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 LHFPL1Q86WI0 220 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 ZFAND1Q8TCF1 268 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
RETREG3-210ENST00000590541 HINT2Q9BX68 163 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 UBQLN2Q9UHD9 624 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 S4R3C0 116 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
RETREG3-210ENST00000590541 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 GABARAPH6UMI1 98 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 RGS5O15539 181 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 CD74P04233 296 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 CD3DP04234 171 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 PGAM2P15259 253 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 TMBIM6P55061 237 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 ABHD1Q96SE0 405 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 NSG2Q9Y328 171 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 UFC1Q9Y3C8 167 aa12.79□□□□□ -0.36
RETREG3-210ENST00000590541 DYNC1H1Q14204 4646 aaKnown RBP12.79□□□□□ -0.36
RETREG3-210ENST00000590541 KIR2DL5BA0A0G2JN68 375 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 KIR2DL5BA0A0G2JPC4 375 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms