RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-227	ENST00000590188	IGHV4-30-4	P0DP06	118 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	TNFSF8	P32971	234 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	SSBP1	Q04837	148 aa	Known RBP	13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	FAM106A	Q4KMX7	169 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	PLET1	Q6UQ28	207 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	GPHB5	Q86YW7	130 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	SGPP2	Q8IWX5	399 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	CADM3	Q8N126	398 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	UBAC2	Q8NBM4	344 aa		13.65	□□□□□ -0.22
CIRBP-227	ENST00000590188	FABP12	A6NFH5	140 aa		13.64	□□□□□ -0.23
CIRBP-227	ENST00000590188	UNQ9165/PRO28630	Q6UXU0	137 aa		13.64	□□□□□ -0.23
CIRBP-227	ENST00000590188	MISP3	Q96FF7	219 aa		13.64	□□□□□ -0.23
CIRBP-227	ENST00000590188	C14orf166	Q9Y224	244 aa	Known RBP	13.64	□□□□□ -0.23
CIRBP-227	ENST00000590188	COL7A1	Q02388	2944 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	LGALS9	O00182	355 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	TGOLN2	O43493	480 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	GUCA2B	Q16661	112 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	DEFB114	Q30KQ6	69 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	TM4SF20	Q53R12	229 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	GTSCR1	Q86UQ5	136 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	OR51S1	Q8NGJ8	323 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	RNASE11	Q8TAA1	199 aa	Known RBP	13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	VN1R17P	Q8TDU5	208 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	SCARB1	Q8WTV0	552 aa		13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	NXF2	Q9GZY0	626 aa	Known RBP	13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188	RSL24D1	Q9UHA3	163 aa	Known RBP	13.63	□□□□□ -0.23
CIRBP-227	ENST00000590188		A0A0G2JRQ6	117 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	ANKRD20A5P	A0PJZ0	165 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	TMEM213	A2RRL7	107 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188		K7EIM0	57 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	GSTZ1	O43708	216 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	OR5AC1	P0C628	307 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	CBLN1	P23435	193 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	HSPE1	P61604	102 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	PRCD	Q00LT1	54 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188		Q56UQ5	140 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	OR2C3	Q8N628	320 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	UXS1	Q8NBZ7	420 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	OR2K2	Q8NGT1	345 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	WDR89	Q96FK6	387 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	WWC2-AS2	Q96NR7	200 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	THAP7	Q9BT49	309 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	C5orf66	Q9H5L9	145 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	PLEKHA3	Q9HB20	300 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	MCUB	Q9NWR8	336 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	C21orf62	Q9NYP8	219 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	RABL2B	Q9UNT1	228 aa		13.62	□□□□□ -0.23
CIRBP-227	ENST00000590188	IGHV3OR16-8	A0A075B7F1	116 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188		A0A0B4J293	547 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	IGHV3-48	P01763	117 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	UCP1	P25874	307 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	CD81	P60033	236 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	PINX1	Q96BK5	328 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	SOST	Q9BQB4	213 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	CHRDL1	Q9BU40	450 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	NAA60	Q9H7X0	242 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	MLX	Q9UH92	298 aa		13.61	□□□□□ -0.23
CIRBP-227	ENST00000590188	ZNF785	A8K8V0	405 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	ST8SIA3	O43173	380 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	ATG12	O94817	140 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	IFNA17	P01571	189 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	CD7	P09564	240 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188		P0C879	139 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	PYDC2	Q56P42	97 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	BTNL8	Q6UX41	500 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	SLC35G3	Q8N808	338 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	OR1L6	Q8NGR2	347 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	OR1P1	Q8NH06	330 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	LHFPL5	Q8TAF8	219 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	RRNAD1	Q96FB5	475 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	PRRT1	Q99946	306 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	WFDC10A	Q9H1F0	79 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	TUBA4B	Q9H853	241 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	PRR13	Q9NZ81	148 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188	GPR132	Q9UNW8	380 aa		13.6	□□□□□ -0.23
CIRBP-227	ENST00000590188		A8MWP6	167 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188		F8W735	103 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	ZNF207	O43670	478 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	ETV6	P41212	452 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	HOXA1	P49639	335 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	ERH	P84090	104 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	ZNF57	Q68EA5	555 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	BSCL2	Q96G97	398 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	RCHY1	Q96PM5	261 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	NEURL2	Q9BR09	285 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	PDCD10	Q9BUL8	212 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	C20orf24	Q9BUV8	137 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	TMEM222	Q9H0R3	208 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	RBM38	Q9H0Z9	239 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	PALMD	Q9NP74	551 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	C19orf73	Q9NVV2	129 aa		13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	TECR	Q9NZ01	308 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-227	ENST00000590188	SCAF4	O95104	1147 aa	Known RBP	13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	MT-CO2	P00403	227 aa		13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	SURF2	Q15527	256 aa	Predicted RBP	13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	TMEM61	Q8N0U2	210 aa		13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	GLYATL2	Q8WU03	294 aa		13.58	□□□□□ -0.24

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