RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MINOS1-NBL1R4GNA1 71 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 SPENQ96T58 3664 aaKnown RBP8.39□□□□□ -1.07
VPS25-203ENST00000589520 A0A087WWC5 75 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 A0A1B0GV50 99 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 C22orf46C9J442 243 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 M0R036 132 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 OVOL3O00110 214 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 CORTO00230 105 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 OR13C7P0DN81 318 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 NPBWR1P48145 328 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 RIPPLY3P57055 190 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 B2MP61769 119 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 RHOBP62745 196 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 PAX2Q02962 417 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 PRSS8Q16651 343 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 ARSJQ5FYB0 599 aaPredicted RBP8.39□□□□□ -1.07
VPS25-203ENST00000589520 TPTE2P1Q5T6R2 138 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 Q8N7P7 452 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 C15orf54Q8N8G6 183 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 MGST2Q99735 147 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 GGTLC1Q9BX51 225 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 ZNF430Q9H8G1 570 aaPredicted RBP8.39□□□□□ -1.07
VPS25-203ENST00000589520 RPS10P5Q9NQ39 176 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 ZNRD1Q9P1U0 126 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
VPS25-203ENST00000589520 HCFC1P51610 2035 aa8.39□□□□□ -1.07
VPS25-203ENST00000589520 C7orf77A4D0Y5 90 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 CXorf65A6NEN9 183 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 ZFP92A6NM28 416 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 CXorf1O96002 111 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 STAG3L2P0CL84 134 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 STAG3L3P0CL85 134 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 COX7A1P24310 79 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 PDLIM4P50479 330 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 ARF6P62330 175 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
VPS25-203ENST00000589520 DIAPH2-AS1Q14236 149 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 HABP2Q14520 560 aaPredicted RBP8.38□□□□□ -1.07
VPS25-203ENST00000589520 PSG5Q15238 335 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 SSX2Q16385 188 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 OR1L6Q8NGR2 347 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 C17orf50Q8WW18 174 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 SIRT7Q9NRC8 400 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 SIGLEC9Q9Y336 463 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 POLQO75417 2590 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 PRRC2CQ9Y520 2896 aaKnown RBP8.38□□□□□ -1.07
VPS25-203ENST00000589520 LRRK2Q5S007 2527 aa8.38□□□□□ -1.07
VPS25-203ENST00000589520 FAM74A7A6NL05 159 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 ODF3BA8MYP8 253 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 H3BQ15 152 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 NDUFS8O00217 210 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 SLC25A17O43808 307 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 CLN5O75503 358 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 FOXH1O75593 365 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 IGHV2-5P01817 119 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 SNRNP70P08621 437 aaKnown RBP8.37□□□□□ -1.07
VPS25-203ENST00000589520 FBP1P09467 338 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 CDKN1AP38936 164 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 RPL27AP46776 148 aaKnown RBP8.37□□□□□ -1.07
VPS25-203ENST00000589520 SELENOTP62341 195 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 PRR20EP86478 221 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 PRR20CP86479 221 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 PRR20DP86480 221 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 PRR20BP86481 221 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 PRR20AP86496 221 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 RNF212Q495C1 297 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 AWAT1Q58HT5 328 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 PPP1R27Q86WC6 154 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 CYB561D1Q8N8Q1 229 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 C22orf15Q8WYQ4 148 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 SLC25A22Q9H936 323 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 SLC45A2Q9UMX9 530 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 POLR3KQ9Y2Y1 108 aaPredicted RBP8.37□□□□□ -1.07
VPS25-203ENST00000589520 TBL2Q9Y4P3 447 aaKnown RBP8.37□□□□□ -1.07
VPS25-203ENST00000589520 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
VPS25-203ENST00000589520 YLPM1P49750 1951 aaKnown RBP8.36□□□□□ -1.07
VPS25-203ENST00000589520 A0A1W2PPR1 153 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 F6UZH7 168 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 C19orf84I3L1E1 186 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 PDE6DO43924 150 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 YIF1AO95070 293 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 OPN1MWP04001 364 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 OPN1MW2P0DN77 364 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 OPN1MW3P0DN78 364 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 FGF8P55075 233 aaPredicted RBP8.36□□□□□ -1.07
VPS25-203ENST00000589520 LGALS4P56470 323 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 TAS2R45P59539 299 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 GAMTQ14353 236 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 MIC13Q5XKP0 118 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 SLC16A13Q7RTY0 426 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 STPG3Q8N7X2 389 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms