RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 CCDC88CQ9P219 2028 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BKO60814 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BJP06899 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BOP23527 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BBP33778 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BDP58876 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BCP62807 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST2H2BEQ16778 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 MAJINQ3KP22 176 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BHQ93079 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BNQ99877 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 HIST1H2BMQ99879 126 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 ARID2Q68CP9 1835 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 KBTBD11-OT1A0A1B0GTJ5 212 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 RPP21Q9H633 154 aaKnown RBP17.96■□□□□ 0.47
PTPRM-211ENST00000580170 IGHV3-49A0A0A0MS15 119 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 TRGV3P03979 118 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 MUC21A0A0G2JKD1 596 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 MUC21A0A140T8X8 626 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 NRN1LQ496H8 165 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 MUC21Q5SSG8 566 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 RNF126Q9BV68 326 aa17.96■□□□□ 0.47
PTPRM-211ENST00000580170 REPIN1Q9BWE0 567 aaKnown RBP17.96■□□□□ 0.47
PTPRM-211ENST00000580170 C9JCJ5 164 aa17.96■□□□□ 0.46
PTPRM-211ENST00000580170 OR52E5Q8NH55 327 aa17.96■□□□□ 0.46
PTPRM-211ENST00000580170 FOXC2Q99958 501 aa17.96■□□□□ 0.46
PTPRM-211ENST00000580170 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
PTPRM-211ENST00000580170 PIKFYVEQ9Y2I7 2098 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 HAX1O00165 279 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 CCL19Q99731 98 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 LRTM2Q8N967 370 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 IGHV2OR16-5A0A0B4J2B6 119 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 TMEM50AO95807 157 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 MRAP2Q96G30 205 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 MRPL20Q9BYC9 149 aaKnown RBP17.95■□□□□ 0.46
PTPRM-211ENST00000580170 IGKV1D-33P01593 117 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 IGKV1-33P01594 117 aa17.95■□□□□ 0.46
PTPRM-211ENST00000580170 M0R381 172 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 PGPEP1LA6NFU8 196 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 CKS1BP61024 79 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 CENPVQ7Z7K6 275 aaPredicted RBP17.94■□□□□ 0.46
PTPRM-211ENST00000580170 FOXH1O75593 365 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 ATP5LO75964 103 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 LINC00614P0C842 121 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 ADMP35318 185 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 PSMG4Q5JS54 123 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 GLRX5Q86SX6 157 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 OR13C6PQ8NH95 151 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 PLPPR1Q8TBJ4 325 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 FBXL7Q9UJT9 491 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 A0A087WV48 116 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 CEACAM4O75871 244 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 GATA2P23769 480 aaPredicted RBP17.94■□□□□ 0.46
PTPRM-211ENST00000580170 PSG7Q13046 419 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 PAPPA-AS1Q5QFB9 102 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 OTOFQ9HC10 1997 aa17.94■□□□□ 0.46
PTPRM-211ENST00000580170 IGHV1-2P23083 117 aa17.93■□□□□ 0.46
PTPRM-211ENST00000580170 ASIPP42127 132 aa17.93■□□□□ 0.46
PTPRM-211ENST00000580170 NUTF2P61970 127 aaKnown RBP17.93■□□□□ 0.46
PTPRM-211ENST00000580170 IZUMO1RA6ND01 250 aa17.93■□□□□ 0.46
PTPRM-211ENST00000580170 CELA3BP08861 270 aa17.93■□□□□ 0.46
PTPRM-211ENST00000580170 RPL23P62829 140 aaKnown RBP17.93■□□□□ 0.46
PTPRM-211ENST00000580170 A0A1B0GUT8 65 aa17.93■□□□□ 0.46
PTPRM-211ENST00000580170 TRAV9-2A0A087WT02 112 aa17.93■□□□□ 0.46
PTPRM-211ENST00000580170 SSBP4Q9BWG4 385 aaPredicted RBP17.92■□□□□ 0.46
PTPRM-211ENST00000580170 SLC25A28Q96A46 364 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 HIST1H2BLQ99880 126 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 NHP2Q9NX24 153 aaKnown RBP17.92■□□□□ 0.46
PTPRM-211ENST00000580170 DLEU1O43261 78 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 C1orf162Q8NEQ5 155 aaPredicted RBP17.92■□□□□ 0.46
PTPRM-211ENST00000580170 LYZL4Q96KX0 146 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 IQCF6A8MYZ5 107 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 CD69Q07108 199 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 DPM3Q9P2X0 92 aa17.92■□□□□ 0.46
PTPRM-211ENST00000580170 SUMO2P61956 95 aaKnown RBP17.91■□□□□ 0.46
PTPRM-211ENST00000580170 Q9H3A6 140 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 TRBV6-7A0A0A0MS04 114 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 DMRTA2Q96SC8 542 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 BSPH1Q075Z2 132 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 OR4X2Q8NGF9 303 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 LY6G6FQ5SQ64 297 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 NUDT10Q8NFP7 164 aa17.91■□□□□ 0.46
PTPRM-211ENST00000580170 RNASEH2CQ8TDP1 164 aaKnown RBP17.91■□□□□ 0.46
PTPRM-211ENST00000580170 DICER1Q9UPY3 1922 aaKnown RBP17.91■□□□□ 0.46
PTPRM-211ENST00000580170 IGKV1D-13A0A0B4J2D9 117 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 IGKV1-13P0DP09 117 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 PSMB11A5LHX3 300 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 SCGB3A1Q96QR1 104 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 PLAURQ03405 335 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 UNC13CQ8NB66 2214 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 LYPD3O95274 346 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 RTN4RL2Q86UN3 420 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 C21orf62Q9NYP8 219 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 PPP1R27Q86WC6 154 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 ARPC1AQ92747 370 aa17.9■□□□□ 0.46
PTPRM-211ENST00000580170 TMEM262E9PQX1 116 aa17.89■□□□□ 0.45
PTPRM-211ENST00000580170 NDUFS6O75380 124 aaKnown RBP17.89■□□□□ 0.45
PTPRM-211ENST00000580170 HEPN1Q6WQI6 88 aa17.89■□□□□ 0.45
PTPRM-211ENST00000580170 FAM90A1Q86YD7 464 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms