RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 OR13C7P0DN81 318 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 AREGP15514 252 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 NPY1RP25929 384 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 CAV2P51636 162 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 BAXQ07812 192 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ZNF345Q14585 488 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ASPHD1Q5U4P2 390 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 Q8N2B8 174 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 SLC25A31Q9H0C2 315 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ZNF702PQ9H963 129 aa13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 STRAPQ9Y3F4 350 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-215ENST00000579780 C15orf62A8K5M9 175 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ARPC5O15511 151 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 CRYGCP07315 174 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 CTRB1P17538 263 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 NUP62P37198 522 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 SNCAP37840 140 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TMEM267Q0VDI3 215 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ECSCRQ19T08 205 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 STX12Q86Y82 276 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 STPG2Q8N412 459 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TMEM252Q8N6L7 170 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 INO80EQ8NBZ0 244 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 LFNGQ8NES3 379 aa13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 FAM110DQ8TAY7 271 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 F11RQ9Y624 299 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-215ENST00000579780 IGSF23A1L1A6 192 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 FAM24AA6NFZ4 105 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 IFNA10P01566 189 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 HKR1P10072 659 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 RPL12P30050 165 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 RAB11AP62491 216 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 EWSR1Q01844 656 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR2F1Q13607 317 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TTC9CQ8N5M4 171 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR1L6Q8NGR2 347 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR1P1Q8NH06 330 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TMEM170AQ8WVE7 144 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 P2RX4Q99571 388 aa13.16□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TRAV41A0A0B4J266 112 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 CORTO00230 105 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 FBXO24O75426 580 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 REG1AP05451 166 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 OR8U8P0C7N1 319 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 APELAP0DMC3 54 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 SULT1A1P50225 295 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 Q6ZS46 218 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 ACOT7LQ6ZUV0 252 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 MFFQ9GZY8 342 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
CDK5RAP3-215ENST00000579780 TSPAN9O75954 239 aa13.14□□□□□ -0.31
CDK5RAP3-215ENST00000579780 KLK9Q2XQG4 91 aa13.14□□□□□ -0.31
CDK5RAP3-215ENST00000579780 KLK9Q9UKQ9 250 aa13.14□□□□□ -0.31
CDK5RAP3-215ENST00000579780 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 G3V318 75 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 CYB5BO43169 146 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 METTL15P1P0C7V9 234 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 EIF2B2P49770 351 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 CFHR3Q02985 330 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 TMEM95Q3KNT9 176 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 ARSJQ5FYB0 599 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 Q6ZSV7 163 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 C9orf62Q8N4C0 152 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 GON7Q9BXV9 100 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 ZC4H2Q9NQZ6 224 aa13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 PAIP2BQ9ULR5 123 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-215ENST00000579780 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 A0A0D9SG52 128 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 PRSS46E5RG02 174 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 H3BUA1 57 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 CST7O76096 145 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 BRI3O95415 125 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 IFNA4P05014 189 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 CRYBA1P05813 215 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 CXCL2P19875 107 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 HBG1P69891 147 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 HBG2P69892 147 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 ETV3LQ6ZN32 361 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 HAPLN4Q86UW8 402 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 KCNRGQ8N5I3 272 aa13.12□□□□□ -0.31
CDK5RAP3-215ENST00000579780 OR2T6Q8NHC8 308 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms