RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 FN1P02751 2386 aaKnown RBP8.47□□□□□ -1.05
SS18-213ENST00000579640 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 NPIPB5A8MRT5 1133 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 TMEM50AO95807 157 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 IFNA10P01566 189 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 BSXQ3C1V8 233 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 ZNF546Q86UE3 836 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 Q8N2B8 174 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 TTC9CQ8N5M4 171 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 SLC25A31Q9H0C2 315 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 ZNF702PQ9H963 129 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 FBXO7Q9Y3I1 522 aa8.47□□□□□ -1.05
SS18-213ENST00000579640 CYB5BO43169 146 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 CRYGCP07315 174 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 AREGP15514 252 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 NPY1RP25929 384 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 CAV2P51636 162 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 RAB11AP62491 216 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 C2orf83Q53S99 150 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.06
SS18-213ENST00000579640 SPANXN5Q5MJ07 72 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 UNQ5815/PRO19632Q6UWF5 114 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 TMEM14EPQ6UXP3 125 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 INO80EQ8NBZ0 244 aaPredicted RBP8.46□□□□□ -1.06
SS18-213ENST00000579640 LFNGQ8NES3 379 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 GON7Q9BXV9 100 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 TNFSF18Q9UNG2 199 aa8.46□□□□□ -1.06
SS18-213ENST00000579640 TRAV41A0A0B4J266 112 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 FAM24AA6NFZ4 105 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 LINC01548A6NM66 108 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 H3BP45 60 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 TSPAN9O75954 239 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 RNASE2P10153 161 aaKnown RBP8.45□□□□□ -1.06
SS18-213ENST00000579640 CTRB1P17538 263 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 RPL12P30050 165 aaKnown RBP8.45□□□□□ -1.06
SS18-213ENST00000579640 BAXQ07812 192 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 ECSCRQ19T08 205 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 ASPHD1Q5U4P2 390 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 CTRB2Q6GPI1 263 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 STX12Q86Y82 276 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 TMEM252Q8N6L7 170 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 OR11H4Q8NGC9 324 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 FAM110DQ8TAY7 271 aaPredicted RBP8.45□□□□□ -1.06
SS18-213ENST00000579640 AQP10Q96PS8 301 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 OR4C12Q96R67 309 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 F11RQ9Y624 299 aaKnown RBP8.45□□□□□ -1.06
SS18-213ENST00000579640 C15orf62A8K5M9 175 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 CORTO00230 105 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 ARPC5O15511 151 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 FBXO24O75426 580 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 OR8U8P0C7N1 319 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 APELAP0DMC3 54 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 SULT1A1P50225 295 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 C19orf54Q5BKX5 351 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 Q6ZS46 218 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 LURAP1LQ8IV03 231 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 STPG2Q8N412 459 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 OR2T6Q8NHC8 308 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 P2RX4Q99571 388 aa8.45□□□□□ -1.06
SS18-213ENST00000579640 H3BUA1 57 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 BRI3O95415 125 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 REG1AP05451 166 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 HNRNPCP07910 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
SS18-213ENST00000579640 HKR1P10072 659 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 DEFA4P12838 97 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 HIST1H1BP16401 226 aaKnown RBP8.44□□□□□ -1.06
SS18-213ENST00000579640 EWSR1Q01844 656 aaKnown RBP eCLIP8.44□□□□□ -1.06
SS18-213ENST00000579640 OR2F1Q13607 317 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 ZNF345Q14585 488 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 PVRIGQ6DKI7 326 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 Q6ZSV7 163 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 RNASEH2CQ8TDP1 164 aaKnown RBP8.44□□□□□ -1.06
SS18-213ENST00000579640 WNT10AQ9GZT5 417 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 MFFQ9GZY8 342 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 ZC4H2Q9NQZ6 224 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 PAIP2BQ9ULR5 123 aaKnown RBP8.44□□□□□ -1.06
SS18-213ENST00000579640 ZFHX3Q15911 3703 aa8.44□□□□□ -1.06
SS18-213ENST00000579640 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 G3V318 75 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 NDUFA7O95182 113 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 IFNA4P05014 189 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 HBG1P69891 147 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 HBG2P69892 147 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 KLK9Q2XQG4 91 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 ETV3LQ6ZN32 361 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 OR5T1Q8NG75 326 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 TMEM170AQ8WVE7 144 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 C16orf95Q9H693 158 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 THYN1Q9P016 225 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 HSPB11Q9Y547 144 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 A0A0D9SG52 128 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 RNF222A6NCQ9 220 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 PMS2P5A8MQ11 134 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 METTL15P1P0C7V9 234 aa8.43□□□□□ -1.06
SS18-213ENST00000579640 PPIFP30405 207 aaKnown RBP8.43□□□□□ -1.06
SS18-213ENST00000579640 SLC35B1P78383 322 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms