RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NEURL2Q9BR09 285 aa9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 TM2D3Q9BRN9 247 aa9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 NDUFA4L2Q9NRX3 87 aa9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 FKBP11Q9NYL4 201 aa9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 TECRQ9NZ01 308 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 RSL24D1Q9UHA3 163 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 KLK9Q9UKQ9 250 aa9.6□□□□□ -0.87
NPLOC4-213ENST00000573519 OR2T8A6NH00 312 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 DBX1A6NMT0 343 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 ZNF785A8K8V0 405 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 C3orf84H3BNL1 204 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 CD7P09564 240 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 MEF2DQ14814 521 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 HAGHQ16775 308 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 SP6Q3SY56 376 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 ZNF57Q68EA5 555 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 UNQ9165/PRO28630Q6UXU0 137 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 UBAC2Q8NBM4 344 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 ZFAND1Q8TCF1 268 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 VN1R17PQ8TDU5 208 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 ZNF486Q96H40 463 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 SEC22AQ96IW7 307 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 TP53RKQ96S44 253 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 SPATA25Q9BR10 227 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 PALMDQ9NP74 551 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 COPZ2Q9P299 210 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 RABL2AQ9UBK7 228 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 RABL2BQ9UNT1 228 aa9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-213ENST00000573519 TMEM213A2RRL7 107 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 C15orf61A6NNL5 157 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 A8MWP6 167 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 DISC1C4P0D8 188 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 TGOLN2O43493 480 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 GSTZ1O43708 216 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 AKAIN1P0CW23 69 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 DEFB125Q8N687 156 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 OR5B3Q8NH48 314 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 MUC7Q8TAX7 377 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 FAM212BQ9NTI7 297 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 MLXQ9UH92 298 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 SORL1Q92673 2214 aa9.58□□□□□ -0.88
NPLOC4-213ENST00000573519 C3orf85A0A1B0GTC6 90 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 ANKRD20A5PA0PJZ0 165 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 OR11H12B2RN74 326 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 SCAF4O95104 1147 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 IGKV1-5P01602 117 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 CTSDP07339 412 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 MFAP2P55001 183 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 TRIM16LQ309B1 348 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 PYDC2Q56P42 97 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 Q56UQ5 140 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 CADM3Q8N126 398 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 CCDC71LQ8N9Z2 235 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 OR51S1Q8NGJ8 323 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 OR1L6Q8NGR2 347 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 TMEM14BQ9NUH8 114 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 C21orf62Q9NYP8 219 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 UFC1Q9Y3C8 167 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
NPLOC4-213ENST00000573519 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 AKR1C2P52895 323 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 RBPMS2Q6ZRY4 209 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 OR52B4Q8NGK2 314 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 SCARB1Q8WTV0 552 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 MISP3Q96FF7 219 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 BSCL2Q96G97 398 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 ZNF436Q9C0F3 470 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 C5orf66Q9H5L9 145 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 MCUBQ9NWR8 336 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 C14orf166Q9Y224 244 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 V9GYH0 126 aa9.56□□□□□ -0.88
NPLOC4-213ENST00000573519 KMT2CQ8NEZ4 4911 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 IGHV3OR16-8A0A075B7F1 116 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 TEX13DA0A0J9YY54 714 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 OR5AC1P0C628 307 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 LYL1P12980 280 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 S100A5P33763 92 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 PRCDQ00LT1 54 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 RNASE11Q8TAA1 199 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 TMEM190Q8WZ59 177 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 MARC2Q969Z3 335 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 CITED4Q96RK1 184 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 PRRT1Q99946 306 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 RETNQ9HD89 108 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 MRPL27Q9P0M9 148 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 GPR132Q9UNW8 380 aa9.55□□□□□ -0.88
NPLOC4-213ENST00000573519 A0A0B4J293 547 aa9.54□□□□□ -0.88
NPLOC4-213ENST00000573519 A0A0G2JRQ6 117 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms