RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
NPLOC4-207ENST00000572346 SHPKQ9UHJ6 478 aa11.41□□□□□ -0.58
NPLOC4-207ENST00000572346 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 C15orf61A6NNL5 157 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 INMT-MINDY4F8WBC2 141 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 SOX15O60248 233 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 SAP30O75446 220 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 EGR2P11161 476 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 MYOD1P15172 320 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 CRIP2P52943 208 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 ANKRD55Q3KP44 614 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 C19orf54Q5BKX5 351 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 LYZL2Q7Z4W2 148 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 OR5T1Q8NG75 326 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 LSM10Q969L4 123 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 GPR146Q96CH1 333 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-207ENST00000572346 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 DHFRP00374 187 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 FGF2P09038 288 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 HOXB5P09067 269 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 FRMD6-AS1P0C7T7 363 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 TRAPPC2P0DI81 140 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 TRAPPC2BP0DI82 140 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 SPNP16150 400 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 MECP2P51608 486 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 SLURP1P55000 103 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 SEC22CQ9BRL7 303 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 QTRT1Q9BXR0 403 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 GPN1Q9HCN4 374 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 TENM2Q9NT68 2774 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 CACNG5Q9UF02 275 aa11.39□□□□□ -0.59
NPLOC4-207ENST00000572346 A0A0G2JRQ6 117 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 LINC01619G3V211 115 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 PTTG1O95997 202 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 IFNA21P01568 189 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 IFNA17P01571 189 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 GP9P14770 177 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 THOC7Q6I9Y2 204 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 ZNF431Q8TF32 576 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 COA4Q9NYJ1 87 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
NPLOC4-207ENST00000572346 DYNC2H1Q8NCM8 4307 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 IGHV4OR15-8A0A075B7B6 117 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 A0A087WW49 117 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 A0A0B4J293 547 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 DBX1A6NMT0 343 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 E7EUB6 86 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 IL5P05113 134 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 LGALS1P09382 135 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 P0C879 139 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 HSPE1P61604 102 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 ACSM6Q6P461 480 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 OR1S1Q8NH92 325 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 RYR2Q92736 4967 aa11.37□□□□□ -0.59
NPLOC4-207ENST00000572346 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 PRAF2O60831 178 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 NMSQ5H8A3 153 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 Q6ZRM9 215 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 HSD17B13Q7Z5P4 300 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 MITD1Q8WV92 249 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 MS4A10Q96PG2 267 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 SRSF8Q9BRL6 282 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 CACFD1Q9UGQ2 172 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 DNAH7Q8WXX0 4024 aa11.36□□□□□ -0.59
NPLOC4-207ENST00000572346 A0A1B0GU03 582 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 CGB1A6NKQ9 187 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 TRGV3P03979 118 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 REG1AP05451 166 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 DEFA4P12838 97 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 LYL1P12980 280 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 AREGP15514 252 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 PSMB6P28072 239 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 TPPP2P59282 170 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 ERHP84090 104 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 PRCDQ00LT1 54 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 SPINK9Q5DT21 86 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
NPLOC4-207ENST00000572346 OR10W1Q8NGF6 305 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms