RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 NEU1Q99519 415 aa9.7□□□□□ -0.86
SMG1-213ENST00000567737 HSD17B10Q99714 261 aaKnown RBP9.7□□□□□ -0.86
SMG1-213ENST00000567737 AIFM2Q9BRQ8 373 aa9.7□□□□□ -0.86
SMG1-213ENST00000567737 CENPOQ9BU64 300 aa9.7□□□□□ -0.86
SMG1-213ENST00000567737 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
SMG1-213ENST00000567737 IGHV3-66A0A0C4DH42 116 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 GYG2O15488 501 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 SLC22A5O76082 557 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 ALPLP05186 524 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 SERPINE2P07093 398 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 ZNF688P0C7X2 276 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 OR13C7P0DN81 318 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 FGF9P31371 208 aaPredicted RBP9.69□□□□□ -0.86
SMG1-213ENST00000567737 HSD17B13Q7Z5P4 300 aaPredicted RBP9.69□□□□□ -0.86
SMG1-213ENST00000567737 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 QTRT1Q9BXR0 403 aaKnown RBP9.69□□□□□ -0.86
SMG1-213ENST00000567737 XCL2Q9UBD3 114 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 SPATA2Q9UM82 520 aa9.69□□□□□ -0.86
SMG1-213ENST00000567737 K7EIM0 57 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 K7EQG2 157 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 APOHP02749 345 aaPredicted RBP9.68□□□□□ -0.86
SMG1-213ENST00000567737 SMR3BP02814 79 aaPredicted RBP9.68□□□□□ -0.86
SMG1-213ENST00000567737 CCL18P55774 89 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 PLAC9Q5JTB6 97 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 RBM48Q5RL73 367 aaKnown RBP9.68□□□□□ -0.86
SMG1-213ENST00000567737 THOC7Q6I9Y2 204 aaKnown RBP9.68□□□□□ -0.86
SMG1-213ENST00000567737 ZNF773Q6PK81 442 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 GSG1LQ6UXU4 331 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 OR56B1Q8NGI3 324 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 TMEM231Q9H6L2 316 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 F11RQ9Y624 299 aaKnown RBP9.68□□□□□ -0.86
SMG1-213ENST00000567737 RFNGQ9Y644 331 aa9.68□□□□□ -0.86
SMG1-213ENST00000567737 EI24O14681 340 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
SMG1-213ENST00000567737 DLK1P80370 383 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 ZNF705AQ6ZN79 300 aaPredicted RBP9.67□□□□□ -0.86
SMG1-213ENST00000567737 LRRTM1Q86UE6 522 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 NXF2Q9GZY0 626 aaKnown RBP9.67□□□□□ -0.86
SMG1-213ENST00000567737 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 CLEC2DQ9UHP7 191 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
SMG1-213ENST00000567737 IRGMA1A4Y4 181 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 ZNF705FA8MVS1 300 aaPredicted RBP9.66□□□□□ -0.86
SMG1-213ENST00000567737 UPK2O00526 184 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 ZNF705DP0CH99 300 aaPredicted RBP9.66□□□□□ -0.86
SMG1-213ENST00000567737 ZNF705BP0CI00 300 aaPredicted RBP9.66□□□□□ -0.86
SMG1-213ENST00000567737 TRAPPC2P0DI81 140 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 TRAPPC2BP0DI82 140 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 BRWD1-AS2P59051 145 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 WT1-ASQ06250 92 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 RCN1Q15293 331 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 P2RY14Q15391 338 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 PHYHIPQ92561 330 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 RAB40CQ96S21 281 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 TAS2R8Q9NYW2 309 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 DIMT1Q9UNQ2 313 aaKnown RBP9.66□□□□□ -0.86
SMG1-213ENST00000567737 OR2W1Q9Y3N9 320 aa9.66□□□□□ -0.86
SMG1-213ENST00000567737 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMG1-213ENST00000567737 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 RPS10-NUDT3A0A1W2PQS6 291 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 KRTAP29-1A8MX34 341 aaPredicted RBP9.65□□□□□ -0.86
SMG1-213ENST00000567737 NUDT3O95989 172 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 IGLV2-14P01704 120 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 HLA-DQB1P01920 261 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 MFAP4P55083 255 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 DAD1P61803 113 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 SMN1Q16637 294 aaKnown RBP9.65□□□□□ -0.86
SMG1-213ENST00000567737 CBR4Q8N4T8 237 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 APH1BQ8WW43 257 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 Q9H8V8 135 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
SMG1-213ENST00000567737 A0A1W2PS18 150 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 CD1AP06126 327 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 GNRHRP30968 328 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 INSL4Q14641 139 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 ICAM4Q14773 271 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 TOMM20LQ6UXN7 152 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 ZNF485Q8NCK3 441 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 LSM10Q969L4 123 aaKnown RBP9.64□□□□□ -0.87
SMG1-213ENST00000567737 SLC25A46Q96AG3 418 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 RAB3CQ96E17 227 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 TXN2Q99757 166 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 PLGRKTQ9HBL7 147 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 KCNK7Q9Y2U2 307 aa9.64□□□□□ -0.87
SMG1-213ENST00000567737 ERICH4A6NGS2 130 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 GNG7O60262 68 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 IFNA5P01569 189 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 FGF2P09038 288 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 NFYAP23511 347 aaPredicted RBP9.63□□□□□ -0.87
SMG1-213ENST00000567737 FUSP35637 526 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMG1-213ENST00000567737 TAS2R31P59538 309 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 EIF4EBP1Q13541 118 aaPredicted RBP9.63□□□□□ -0.87
SMG1-213ENST00000567737 ACSM3Q53FZ2 586 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
SMG1-213ENST00000567737 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms