RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CLN6Q9NWW5 311 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 BABAM2Q9NXR7 383 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 KAAG1Q9UBP8 84 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 WARS2Q9UGM6 360 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF230Q9UIE0 474 aaPredicted RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 KIF25Q9UIL4 384 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ENPP5Q9UJA9 477 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 VPREB3Q9UKI3 123 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HHLA2Q9UM44 414 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 BAIAP2Q9UQB8 552 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 AP3M1Q9Y2T2 418 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 AK6Q9Y3D8 172 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 GMPPBQ9Y5P6 360 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 MPC1Q9Y5U8 109 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PEX16Q9Y5Y5 336 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 KPTNQ9Y664 436 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 S4R3C0 116 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 V9GYS6 101 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 FAT1Q14517 4588 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TENM3Q9P273 2699 aa0.78□□□□□ -2.29
SMG1-212ENST00000566328 UBR4Q5T4S7 5183 aa0.78□□□□□ -2.29
SMG1-212ENST00000566328 VPS13BQ7Z7G8 4022 aa0.78□□□□□ -2.29
SMG1-212ENST00000566328 APOBP04114 4563 aaKnown RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGHV3OR16-13A0A075B7E8 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGHV3OR16-8A0A075B7F1 116 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGHV3-21A0A0B4J1V1 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGHV3-74A0A0B4J1X5 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 TRAV3A0A0B4J244 114 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGHV1-3A0A0C4DH29 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1-6A0A0C4DH72 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 A0A0U1RQV5 110 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 KBTBD11-OT1A0A1B0GTJ5 212 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 A0A1W2PRV1 198 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 hADV38S2A0JD32 116 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IZUMO1RA6ND01 250 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 MEIS3P1A6NDR6 274 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 TMEM210A6NLX4 147 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 ZNF705EA8MWA4 302 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 ODF3BA8MYP8 253 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 LEUTXA8MZ59 168 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 C12orf77C9JDV5 145 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 E7EUB6 86 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 H0YHG0 523 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 H0YJX3 145 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 C15orf65H3BRN8 121 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 H3BSA7 217 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 J3QT63 122 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 M0R1W7 72 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CCRL2O00421 344 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 SDCBPO00560 298 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 GABRPO00591 440 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 XRCC2O43543 280 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 NDUFA2O43678 99 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 SOX15O60248 233 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CRTAPO75718 401 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 CIB2O75838 187 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 SULT1C4O75897 302 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 DHRS3O75911 302 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 OR7C1O76099 320 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 NDUFA7O95182 113 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 BRI3O95415 125 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 FADS2O95864 444 aaKnown RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 SERPINA3P01011 423 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1D-33P01593 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1-33P01594 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 TRBV12-3P01733 135 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 HBZP02008 142 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1-16P04430 117 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 ISG15P05161 165 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 REG1AP05451 166 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 HTR1AP08908 422 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 FBP1P09467 338 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 SCTP09683 121 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 OCM2P0CE71 109 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 OCMP0CE72 109 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 GSTT2P0CG29 244 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 GSTT2BP0CG30 244 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 HSMCR30P0CW71 290 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CT45A6P0DMU7 189 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CT45A5P0DMU8 189 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CT45A7P0DMV0 189 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 SRMP19623 302 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 PCMT1P22061 227 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CCL1P22362 96 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 TUBG1P23258 451 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 PAX7P23759 505 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 HTR1DP28221 377 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 ZNF93P35789 620 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 PPP1CCP36873 323 aaKnown RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 CEACAM6P40199 344 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 GLP1RP43220 463 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 VDAC2P45880 294 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 NMUP48645 174 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 RBP2P50120 134 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 GBX2P52951 348 aaPredicted RBP0.77□□□□□ -2.29
SMG1-212ENST00000566328 BLVRAP53004 296 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 PRRX1P54821 245 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 ACTBP60709 375 aa0.77□□□□□ -2.29
SMG1-212ENST00000566328 CDC42P60953 191 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms