RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ELOCQ15369 112 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 TOMM34Q15785 309 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF141Q15928 474 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CLEC19AQ6UXS0 136 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 VN1R4Q7Z5H5 301 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 GKN2Q86XP6 184 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SNX29P2Q8IUI4 249 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR6V1Q8N148 313 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR8D4Q8NGM9 314 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR2Y1Q8NGV0 311 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SMIM4Q8WVI0 70 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SMIM8Q96KF7 97 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 GPX7Q96SL4 187 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF251Q9BRH9 671 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF649Q9BS31 505 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 RTBDNQ9BSG5 229 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF426Q9BUY5 554 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 PLA2G12AQ9BZM1 189 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR51V1Q9H2C8 321 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 RERGLQ9H628 205 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 WDR54Q9H977 334 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SND1-IT1Q9HBX3 110 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 UBQLN4Q9NRR5 601 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SDHAF2Q9NX18 166 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 MED11Q9P086 117 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SCP2D1Q9UJQ7 156 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 GNG8Q9UK08 70 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ALG5Q9Y673 324 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 EXPH5Q8NEV8 1989 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 HEATR5AQ86XA9 2040 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CEP192Q8TEP8 1941 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 A0A087WUJ7 227 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1B0GTI1 187 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 TLCD2A6NGC4 264 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SNRPGP15A8MWD9 76 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 H0YGG7 62 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SMLR1H3BR10 107 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CLDN34H7C241 214 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 J3QLW9 94 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 J3QRE1 110 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF593O00488 134 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 TOX3O15405 576 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SLC31A1O15431 190 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 EEF1E1O43324 174 aaKnown RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR2T1O43869 369 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 DHRS3O75911 302 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 TCRBP04435 133 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CD14P08571 375 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 M6PRP20645 277 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CRABP1P29762 137 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 AGTR1P30556 359 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CAPZBP47756 277 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR12D2P58182 307 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 Q499Y3 187 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ACSM3Q53FZ2 586 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM69Q5SWH9 247 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 BCL2L15Q5TBC7 163 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 LPCAT3Q6P1A2 487 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 DAZ4Q86SG3 579 aaKnown RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 SGPP2Q8IWX5 399 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 YIPF7Q8N8F6 280 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR52R1Q8NGF1 315 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR4D11Q8NGI4 311 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR1P1Q8NH06 330 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 OR5AK2Q8NH90 309 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 FAM57AQ8TBR7 257 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF431Q8TF32 576 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CPNE2Q96FN4 548 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ADTRPQ96IZ2 230 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF75AQ96N20 296 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 PARD6GQ9BYG4 376 aaPredicted RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 MIXL1Q9H2W2 232 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 PLEKHA1Q9HB21 404 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 C12orf4Q9NQ89 552 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 DAZ1Q9NQZ3 744 aaKnown RBP2.49□□□□□ -2.01
LINC00560-201ENST00000564593 PRTFDC1Q9NRG1 225 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 CYB5R1Q9UHQ9 305 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 HSPB11Q9Y547 144 aa2.49□□□□□ -2.01
LINC00560-201ENST00000564593 TRAV27A0A087WT01 109 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1W2PQD3 144 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1W2PRG6 482 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 IFITM5A6NNB3 132 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 M0QXV9 152 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SULT1C2O00338 296 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 CDC42EP2O14613 210 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 TCAPO15273 167 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 EPPINO95925 133 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 C1QCP02747 245 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 IL5P05113 134 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SEC11BP0C7V7 166 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 PET100P0DJ07 73 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 RNASE2P10153 161 aaKnown RBP2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SPNP16150 400 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 FKBP2P26885 142 aaKnown RBP2.48□□□□□ -2.01
LINC00560-201ENST00000564593 PEBP1P30086 187 aaKnown RBP2.48□□□□□ -2.01
LINC00560-201ENST00000564593 UTRNP46939 3433 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 DNASE1L1P49184 302 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 CDC34P49427 236 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms