RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	WDR89	Q96FK6	387 aa	Predicted RBP	16.38	■□□□□ 0.21
PPP4C-205	ENST00000563200	BCL7B	Q9BQE9	202 aa		16.38	■□□□□ 0.21
PPP4C-205	ENST00000563200	NEURL2	Q9BR09	285 aa		16.38	■□□□□ 0.21
PPP4C-205	ENST00000563200	STARD9	Q9P2P6	4700 aa		16.38	■□□□□ 0.21
PPP4C-205	ENST00000563200	RGS5	O15539	181 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200		P0C879	139 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	TAS2R19	P59542	299 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	SSBP1	Q04837	148 aa	Known RBP	16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	TMEM61	Q8N0U2	210 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	OR1L6	Q8NGR2	347 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	OR1P1	Q8NH06	330 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	TP53RK	Q96S44	253 aa		16.37	■□□□□ 0.21
PPP4C-205	ENST00000563200	IGHV3-35	A0A0C4DH35	117 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	OR2T8	A6NH00	312 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	C3orf84	H3BNL1	204 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	PGAM2	P15259	253 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	ELL	P55199	621 aa	Predicted RBP	16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	MRPS10	P82664	201 aa	Known RBP	16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	PRCD	Q00LT1	54 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	ZNF57	Q68EA5	555 aa	Predicted RBP	16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	STEAP1B	Q6NZ63	245 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	OR2C3	Q8N628	320 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	OR4A16	Q8NH70	328 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	BSCL2	Q96G97	398 aa	Predicted RBP	16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	TUBA4B	Q9H853	241 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	PLEKHA3	Q9HB20	300 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	SLC2A8	Q9NY64	477 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	C21orf62	Q9NYP8	219 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	CCDC59	Q9P031	241 aa	Known RBP	16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	SELENOK	Q9Y6D0	94 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	IGHV3-21	A0A0B4J1V1	117 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	RAB3D	O95716	219 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	IGKV1-5	P01602	117 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	ADM	P35318	185 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	PPP5C	P53041	499 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	HSPE1	P61604	102 aa	Known RBP	16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	GUCA2B	Q16661	112 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	ZNF114	Q8NC26	417 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	SMIM4	Q8WVI0	70 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	TMEM190	Q8WZ59	177 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	MARC2	Q969Z3	335 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	CITED4	Q96RK1	184 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	CHRDL1	Q9BU40	450 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	PALMD	Q9NP74	551 aa		16.36	■□□□□ 0.21
PPP4C-205	ENST00000563200	IZUMO4	Q1ZYL8	232 aa		16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	SPSB3	Q6PJ21	355 aa		16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	OR13C8	Q8NGS7	320 aa		16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	MUC7	Q8TAX7	377 aa		16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	ZNF414	Q96IQ9	312 aa		16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	MRPL27	Q9P0M9	148 aa	Known RBP	16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	UFC1	Q9Y3C8	167 aa		16.35	■□□□□ 0.21
PPP4C-205	ENST00000563200	SACS	Q9NZJ4	4579 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	C3orf85	A0A1B0GTC6	90 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	CTDSPL	O15194	276 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	RPL5	P46777	297 aa	Known RBP	16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	BTNL8	Q6UX41	500 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	DEFB125	Q8N687	156 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	ZFAND1	Q8TCF1	268 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	SPATA25	Q9BR10	227 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200	WFDC10A	Q9H1F0	79 aa		16.34	■□□□□ 0.21
PPP4C-205	ENST00000563200		A0A0B4J293	547 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200		I3L2K1	104 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	CTSD	P07339	412 aa	Predicted RBP	16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	SCGB2B2	Q4G0G5	96 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	FAAP20	Q6NZ36	180 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	MARCH1	Q8TCQ1	289 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	DIRAS2	Q96HU8	199 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	SLIRP	Q9GZT3	109 aa	Known RBP	16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	EDA2R	Q9HAV5	297 aa		16.33	■□□□□ 0.2
PPP4C-205	ENST00000563200	RBMY1B	A6NDE4	496 aa	Known RBP	16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	RBMY1E	A6NEQ0	496 aa	Known RBP	16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	OR11H12	B2RN74	326 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200		H3BMQ9	156 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	CTSG	P08311	255 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	RBMY1D	P0C7P1	496 aa	Known RBP	16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	UCP1	P25874	307 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	FCGR2B	P31994	310 aa	Predicted RBP	16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	MEF2D	Q14814	521 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	COPZ2	Q9P299	210 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	RABL2A	Q9UBK7	228 aa	Predicted RBP	16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	RABL2B	Q9UNT1	228 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	CEPT1	Q9Y6K0	416 aa		16.32	■□□□□ 0.2
PPP4C-205	ENST00000563200	TENM2	Q9NT68	2774 aa		16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	TRAV25	A0A0B4J276	109 aa		16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	INS-IGF2	F8WCM5	200 aa		16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	NDUFA4	O00483	81 aa		16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	SP6	Q3SY56	376 aa		16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	CCDC71L	Q8N9Z2	235 aa		16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	RTBDN	Q9BSG5	229 aa	Predicted RBP	16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	DAZ1	Q9NQZ3	744 aa	Known RBP	16.31	■□□□□ 0.2
PPP4C-205	ENST00000563200	SCAF4	O95104	1147 aa	Known RBP	16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	IL18	Q14116	193 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	CASC10	Q5T4H9	136 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	SLC16A13	Q7RTY0	426 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	UBAC2	Q8NBM4	344 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	SOST	Q9BQB4	213 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	C5orf66	Q9H5L9	145 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200	BATF3	Q9NR55	127 aa		16.3	■□□□□ 0.2
PPP4C-205	ENST00000563200		A0A0G2JRQ6	117 aa		16.29	■□□□□ 0.2
PPP4C-205	ENST00000563200	B3GALNT1	O75752	331 aa		16.29	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms