RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RPL18Q07020 188 aaKnown RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 PSG7Q13046 419 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 EIF3IQ13347 325 aaKnown RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 RRN3P1Q2M238 152 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 LINC00303Q3SY05 128 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 TMEM69Q5SWH9 247 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 FAM104BQ5XKR9 115 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 ZNF322Q6U7Q0 402 aaPredicted RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 LCA10Q71F78 164 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 DEFB132Q7Z7B7 95 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 KTN1-AS1Q86SY8 53 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 LRRC28Q86X40 367 aaPredicted RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 GPHB5Q86YW7 130 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 ZNF695Q8IW36 515 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 MIR7-3HGQ8N6C7 128 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 PACRGLQ8N7B6 248 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 OR51A4Q8NGJ6 313 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 OR8D4Q8NGM9 314 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 SGMS2Q8NHU3 365 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 FNDC9Q8TBE3 224 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 ZNF721Q8TF20 911 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 H1FXQ92522 213 aaKnown RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 ARL11Q969Q4 196 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 ELSPBP1Q96BH3 223 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 ZNF799Q96GE5 643 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 SLC25A21Q9BQT8 299 aaPredicted RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 PYGO2Q9BRQ0 406 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 MIEN1Q9BRT3 115 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 POPDC3Q9HBV1 291 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 FAM60AQ9NP50 221 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 LHX9Q9NQ69 397 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 OSTCQ9NRP0 149 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 NAT8Q9UHE5 227 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 MED31Q9Y3C7 131 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 AMMECR1Q9Y4X0 333 aaPredicted RBP1.42□□□□□ -2.18
RTF1-207ENST00000561076 HEY1Q9Y5J3 304 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 U3KQ87 197 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 ROBO3Q96MS0 1386 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 A2ML1A8K2U0 1454 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 SETBP1Q9Y6X0 1596 aa1.42□□□□□ -2.18
RTF1-207ENST00000561076 PTPRJQ12913 1337 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 RGS12O14924 1447 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 BLMP54132 1417 aaPredicted RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 AGLP35573 1532 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZMYM4Q5VZL5 1548 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ABCA9Q8IUA7 1624 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TDRD15B5MCY1 1934 aaKnown RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 TRGV10A0A0A0MS01 117 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TRAV41A0A0B4J266 112 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 A0A1B0GV90 55 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TRDV1A0A1B0GX56 115 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 C7orf66A4D0T2 115 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 C9JAW5 83 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ATP6V1G2-DDX39BF2Z307 99 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 PHOX2AO14813 284 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 SLC22A1O15245 554 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 DLEU1O43261 78 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF73O43830 326 aaPredicted RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 OR2T1O43869 369 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF324O75467 553 aaPredicted RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 TNFSF15O95150 251 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 IFNGP01579 166 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 IGHV1-69P01742 117 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TRGV3P03979 118 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TRGC2P03986 189 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 IFNA4P05014 189 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF823P16415 610 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 RPL7P18124 248 aaKnown RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 GPX2P18283 190 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 CRHBPP24387 322 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 KLF3P57682 345 aaPredicted RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 SELENOWP63302 87 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 FUT5Q11128 374 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 OR8G1Q15617 311 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 MSMO1Q15800 293 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 VMA21Q3ZAQ7 101 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 MRPL51Q4U2R6 128 aaKnown RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 C10orf91Q5T1B1 145 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 EIF5AL1Q6IS14 154 aaKnown RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 NOXRED1Q6NXP6 359 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 IDO2Q6ZQW0 420 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 Q6ZR03 302 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 NTM-AS1Q6ZSK4 140 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF329Q86UD4 541 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 GTSCR1Q86UQ5 136 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 HIST3H2BBQ8N257 126 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 EXOC3-AS1Q8N2X6 119 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 LRRC18Q8N456 261 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF283Q8N7M2 679 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 Q8N7P7 452 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 OR51T1Q8NGJ9 327 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 OR4C16Q8NGL9 310 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 OR2T10Q8NGZ9 312 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 CIRBP-AS1Q8TBR5 109 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 SCGB3A1Q96QR1 104 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TP53RKQ96S44 253 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 C12orf57Q99622 126 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BLQ99880 126 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 C2orf88Q9BSF0 95 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms