RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 BMPR1BO00238 502 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 NUPL2O15504 423 aaKnown RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 OR2C1O95371 312 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 TRBV12-3P01733 135 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 IGHV3-23P01764 117 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 OR5AC1P0C628 307 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 NHLRC4P0CG21 123 aaPredicted RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 GP9P14770 177 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 MYOD1P15172 320 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 SUB1P53999 127 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNX1-205ENST00000559339 HSPE1P61604 102 aaKnown RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 PRCDQ00LT1 54 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 DHODHQ02127 395 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 ZNF45Q02386 682 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 RELQ04864 619 aaPredicted RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 WT1-ASQ06250 92 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 SP6Q3SY56 376 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 FAAP20Q6NZ36 180 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 SPSB3Q6PJ21 355 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 GPHB5Q86YW7 130 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 FAM219AQ8IW50 185 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 SLC35G3Q8N808 338 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 OR10W1Q8NGF6 305 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 OR51S1Q8NGJ8 323 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 OR4C16Q8NGL9 310 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 OR1P1Q8NH06 330 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 DYNLRB2Q8TF09 96 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 RBPMSQ93062 196 aaKnown RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 BSCL2Q96G97 398 aaPredicted RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 SEC22AQ96IW7 307 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 FANCD2OSQ96PS1 177 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 PRR25Q96S07 402 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 TP53RKQ96S44 253 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 ATP6V0BQ99437 205 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 B9D2Q9BPU9 175 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 SLC25A21Q9BQT8 299 aaPredicted RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 NXF2Q9GZY0 626 aaKnown RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 NAA60Q9H7X0 242 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 PALMDQ9NP74 551 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 SLC2A8Q9NY64 477 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 C21orf62Q9NYP8 219 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 F11RQ9Y624 299 aaKnown RBP3.35□□□□□ -1.87
SNX1-205ENST00000559339 A0A1B0GW64 132 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 MFSD2BA6NFX1 497 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 OR2T8A6NH00 312 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 CGB1A6NKQ9 187 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 CENPXA8MT69 81 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 PPP5D1E7EU14 171 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 NDUFB8O95169 186 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 CDS2O95674 445 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 IGLV1-51P01701 117 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 HLA-AP01891 365 aaKnown RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 SPNP16150 400 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 AKR1C4P17516 323 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 UCP1P25874 307 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 GPR183P32249 361 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 ETV6P41212 452 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 HOXA1P49639 335 aaPredicted RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 SRPXP78539 464 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 KLK9Q2XQG4 91 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 ANKRD55Q3KP44 614 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 Q56UQ5 140 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 TMEM128Q5BJH2 165 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 TRIQKQ629K1 86 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 ZNF57Q68EA5 555 aaPredicted RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 TMED4Q7Z7H5 227 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 LGI3Q8N145 548 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 OR2C3Q8N628 320 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 UBAC2Q8NBM4 344 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 OR2K2Q8NGT1 345 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 GLYATL2Q8WU03 294 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 MARC2Q969Z3 335 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 PINX1Q96BK5 328 aaKnown RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 MISP3Q96FF7 219 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 GALNT14Q96FL9 552 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 CCDC140Q96MF4 163 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 SOSTQ9BQB4 213 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 RTBDNQ9BSG5 229 aaPredicted RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 TMEM222Q9H0R3 208 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 HIPK2Q9H2X6 1198 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 C5orf66Q9H5L9 145 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 TECRQ9NZ01 308 aaKnown RBP3.34□□□□□ -1.87
SNX1-205ENST00000559339 KLK9Q9UKQ9 250 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 GPR132Q9UNW8 380 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 UFC1Q9Y3C8 167 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 S4R3C0 116 aa3.34□□□□□ -1.87
SNX1-205ENST00000559339 A0A0B4J293 547 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 RPS10-NUDT3A0A1W2PQS6 291 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 NAP1L6A6NFF2 107 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 CRYM-AS1A6NIL9 109 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 C2orf70A6NJV1 201 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 A8MWP6 167 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 INS-IGF2F8WCM5 200 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 NDUFA4O00483 81 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 ST8SIA3O43173 380 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 TGOLN2O43493 480 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms