RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NPVFQ9HCQ7 196 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 KCNIP2Q9NS61 270 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 C1RLQ9NZP8 487 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 AKAP6Q13023 2319 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
TPM1-215ENST00000558868 IGHV1-69DA0A0B4J2H0 117 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 SMCO3A2RU48 225 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 BTBD17A6NE02 478 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 TSPAN15O95858 294 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 IGHV1-69P01742 117 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
TPM1-215ENST00000558868 MDKP21741 143 aaPredicted RBP11.04□□□□□ -0.64
TPM1-215ENST00000558868 CNTFRP26992 372 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 SAA4P35542 130 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 ZNF616Q08AN1 781 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 PJVKQ0ZLH3 352 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 RAB31Q13636 194 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 LYPD6BQ8NI32 183 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 RNASEH2CQ8TDP1 164 aaKnown RBP11.04□□□□□ -0.64
TPM1-215ENST00000558868 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
TPM1-215ENST00000558868 RSG1Q9BU20 258 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 CELSR1Q9NYQ6 3014 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 DCHS2Q6V1P9 2916 aa11.04□□□□□ -0.64
TPM1-215ENST00000558868 CENPEQ02224 2701 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 I3L521 148 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 HBE1P02100 147 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 OR13C7P0DN81 318 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 TMEM11P17152 192 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 GPX4P36969 197 aaPredicted RBP11.03□□□□□ -0.64
TPM1-215ENST00000558868 KRTAP10-9P60411 292 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 LOXL1Q08397 574 aaPredicted RBP11.03□□□□□ -0.64
TPM1-215ENST00000558868 HNF4GQ14541 408 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 TMEM41BQ5BJD5 291 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 PRSS57Q6UWY2 283 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
TPM1-215ENST00000558868 CGB1A6NKQ9 187 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 KRBOX1C9JBD0 128 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 J3QLI3 93 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 CNIH1O95406 144 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 H2AFB1P0C5Y9 115 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 GNB1P62873 340 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 C5orf64Q2M2E5 130 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 C10orf55Q5SWW7 151 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 ETFRF1Q6IPR1 90 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 DYNAPQ8N1N2 210 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 Q8N6K4 173 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 ZNF114Q8NC26 417 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 NPCDR1Q9BY65 106 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 C7orf69Q9H7B7 122 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 CRYBG3Q68DQ2 2970 aa11.02□□□□□ -0.65
TPM1-215ENST00000558868 IGLC7A0M8Q6 106 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 CORTO00230 105 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 ACOT6Q3I5F7 207 aaPredicted RBP11.01□□□□□ -0.65
TPM1-215ENST00000558868 TEPPQ6URK8 271 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 SRSF12Q8WXF0 261 aaKnown RBP11.01□□□□□ -0.65
TPM1-215ENST00000558868 AJUBAQ96IF1 538 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 HIF1ANQ9NWT6 349 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
TPM1-215ENST00000558868 A0A096LNT2 108 aa11□□□□□ -0.65
TPM1-215ENST00000558868 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
TPM1-215ENST00000558868 NCBP2LA6PVI3 153 aaKnown RBP11□□□□□ -0.65
TPM1-215ENST00000558868 E7EUB6 86 aa11□□□□□ -0.65
TPM1-215ENST00000558868 OPRK1P41145 380 aa11□□□□□ -0.65
TPM1-215ENST00000558868 FHITP49789 147 aa11□□□□□ -0.65
TPM1-215ENST00000558868 BPIFB3P59826 476 aa11□□□□□ -0.65
TPM1-215ENST00000558868 CD69Q07108 199 aa11□□□□□ -0.65
TPM1-215ENST00000558868 FFAR4Q5NUL3 377 aa11□□□□□ -0.65
TPM1-215ENST00000558868 Q5PR19 223 aa11□□□□□ -0.65
TPM1-215ENST00000558868 TMEM144Q7Z5S9 345 aa11□□□□□ -0.65
TPM1-215ENST00000558868 OR1L6Q8NGR2 347 aa11□□□□□ -0.65
TPM1-215ENST00000558868 OR1P1Q8NH06 330 aa11□□□□□ -0.65
TPM1-215ENST00000558868 C17orf50Q8WW18 174 aa11□□□□□ -0.65
TPM1-215ENST00000558868 P2RX4Q99571 388 aa11□□□□□ -0.65
TPM1-215ENST00000558868 PBDC1Q9BVG4 233 aa11□□□□□ -0.65
TPM1-215ENST00000558868 RFNGQ9Y644 331 aa11□□□□□ -0.65
TPM1-215ENST00000558868 TRAV40A0A0B4J280 105 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 A0A1B0GW64 132 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 TEX22C9J3V5 150 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 CYB5BO43169 146 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 ZP3P21754 424 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 CD24P25063 80 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 ELLP55199 621 aaPredicted RBP10.99□□□□□ -0.65
TPM1-215ENST00000558868 FXYD3Q14802 87 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 ARSJQ5FYB0 599 aaPredicted RBP10.99□□□□□ -0.65
TPM1-215ENST00000558868 TOR2AQ5JU69 321 aa10.99□□□□□ -0.65
TPM1-215ENST00000558868 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms