RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 OR11H12B2RN74 326 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 K7EIM0 57 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 TGOLN2O43493 480 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 TPPPO94811 219 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 TAS2R19P59542 299 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 TRIM16LQ309B1 348 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 ZNF57Q68EA5 555 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-208ENST00000558827 ZFAND6Q6FIF0 208 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 DYNC2LI1Q8TCX1 351 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 PINX1Q96BK5 328 aaKnown RBP9.42□□□□□ -0.9
SMAD3-208ENST00000558827 TMEM56Q96MV1 263 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 SRSF8Q9BRL6 282 aaKnown RBP9.42□□□□□ -0.9
SMAD3-208ENST00000558827 TMEM14BQ9NUH8 114 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 COPZ2Q9P299 210 aa9.42□□□□□ -0.9
SMAD3-208ENST00000558827 IGHV3-49A0A0A0MS15 119 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 C3orf85A0A1B0GTC6 90 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
SMAD3-208ENST00000558827 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
SMAD3-208ENST00000558827 GABARAPH6UMI1 98 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 CYB5BO43169 146 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
SMAD3-208ENST00000558827 AKR1C2P52895 323 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 THOC7Q6I9Y2 204 aaKnown RBP9.41□□□□□ -0.9
SMAD3-208ENST00000558827 OR2K2Q8NGT1 345 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 TERB2Q8NHR7 220 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 TSC22D3Q99576 134 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 SRD5A3Q9H8P0 318 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 GAR1Q9NY12 217 aaKnown RBP9.41□□□□□ -0.9
SMAD3-208ENST00000558827 SLC2A8Q9NY64 477 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
SMAD3-208ENST00000558827 TECRQ9NZ01 308 aaKnown RBP9.41□□□□□ -0.9
SMAD3-208ENST00000558827 A0A0G2JRQ6 117 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-208ENST00000558827 H3BMQ9 156 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 CD74P04233 296 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 ADMP35318 185 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 ETV6P41212 452 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 RND3P61587 244 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
SMAD3-208ENST00000558827 HSD17B13Q7Z5P4 300 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-208ENST00000558827 ARRDC1Q8N5I2 433 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 OR2C3Q8N628 320 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 OR52B4Q8NGK2 314 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 OR4C16Q8NGL9 310 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 OR5B3Q8NH48 314 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 RNASE11Q8TAA1 199 aaKnown RBP9.4□□□□□ -0.9
SMAD3-208ENST00000558827 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 PALMDQ9NP74 551 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 CEPT1Q9Y6K0 416 aa9.4□□□□□ -0.9
SMAD3-208ENST00000558827 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 A0A0B4J293 547 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 TEX13DA0A0J9YY54 714 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 A8MZ25 164 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 DISC1C4P0D8 188 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 ST8SIA3O43173 380 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 NOL3O60936 208 aaKnown RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 YIF1AO95070 293 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 MT-CO2P00403 227 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 IFNA17P01571 189 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 RPL5P46777 297 aaKnown RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 TMBIM6P55061 237 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 MUC7Q8TAX7 377 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 C15orf40Q8WUR7 153 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 TMEM190Q8WZ59 177 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 ISOC1Q96CN7 298 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 ZNF486Q96H40 463 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 RTBDNQ9BSG5 229 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 ZNF436Q9C0F3 470 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 FAM212BQ9NTI7 297 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 CCDC59Q9P031 241 aaKnown RBP9.39□□□□□ -0.91
SMAD3-208ENST00000558827 UBQLN2Q9UHD9 624 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
SMAD3-208ENST00000558827 IGKV3-7A0A075B6H7 116 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 A8MWP6 167 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 I3L2K1 104 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 NXPH3O95157 252 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 CTSDP07339 412 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-208ENST00000558827 FGF2P09038 288 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 OR5AC1P0C628 307 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 TBPP20226 339 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 TNFSF8P32971 234 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 ERHP84090 104 aaKnown RBP9.38□□□□□ -0.91
SMAD3-208ENST00000558827 MLANAQ16655 118 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 Q6ZRM9 215 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 SLC35G3Q8N808 338 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 OR51S1Q8NGJ8 323 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 OR1P1Q8NH06 330 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 MCFD2Q8NI22 146 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms