RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LYSMD2Q8IV50 215 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 UBAC2Q8NBM4 344 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 SCARB1Q8WTV0 552 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 FUNDC2Q9BWH2 189 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 C5orf66Q9H5L9 145 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 TMEM14BQ9NUH8 114 aa10.59□□□□□ -0.71
SNX6-210ENST00000557341 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 IGHV3-21A0A0B4J1V1 117 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 K7EIM0 57 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 JTBO76095 146 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 VBP1P61758 197 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 Q56UQ5 140 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 TBC1D26Q86UD7 250 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 OR2C3Q8N628 320 aa10.58□□□□□ -0.72
SNX6-210ENST00000557341 DBX1A6NMT0 343 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 F8W735 103 aaPredicted RBP10.57□□□□□ -0.72
SNX6-210ENST00000557341 TSPAN4O14817 238 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 LAMTOR1Q6IAA8 161 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 H2BFWTQ7Z2G1 175 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 CHRDL1Q9BU40 450 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 C20orf24Q9BUV8 137 aa10.57□□□□□ -0.72
SNX6-210ENST00000557341 EPPK1P58107 5090 aaKnown RBP10.56□□□□□ -0.72
SNX6-210ENST00000557341 HPGDSO60760 199 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 ELK1P19419 428 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 ADMP35318 185 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 APOC4P55056 127 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 UCP3P55916 312 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 RELQ04864 619 aaPredicted RBP10.56□□□□□ -0.72
SNX6-210ENST00000557341 OR4A16Q8NH70 328 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 MRGPRFQ96AM1 343 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
SNX6-210ENST00000557341 IGHV3OR16-8A0A075B7F1 116 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 OR4C46A6NHA9 309 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 C15orf62A8K5M9 175 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 K7EMT4 169 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 NUPL2O15504 423 aaKnown RBP10.55□□□□□ -0.72
SNX6-210ENST00000557341 RORCP51449 518 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 PRCDQ00LT1 54 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 ZNF114Q8NC26 417 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 AP3S1Q92572 193 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 UBQLN2Q9UHD9 624 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 ALMS1Q8TCU4 4167 aa10.55□□□□□ -0.72
SNX6-210ENST00000557341 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
SNX6-210ENST00000557341 FAM25AB3EWG3 89 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 FAM25CB3EWG5 89 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 FAM25GB3EWG6 89 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 M0QYG6 137 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
SNX6-210ENST00000557341 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 ODF3L2Q3SX64 289 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 RNASE12Q5GAN4 147 aaKnown RBP10.54□□□□□ -0.72
SNX6-210ENST00000557341 RNASE10Q5GAN6 216 aaKnown RBP10.54□□□□□ -0.72
SNX6-210ENST00000557341 MZT2AQ6P582 158 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
SNX6-210ENST00000557341 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
SNX6-210ENST00000557341 I3L2K1 104 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 CTSGP08311 255 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 PGAM2P15259 253 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 FCGR2BP31994 310 aaPredicted RBP10.53□□□□□ -0.72
SNX6-210ENST00000557341 MFAP4P55083 255 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 RND3P61587 244 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 Q6ZWC4 215 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 ARRDC1Q8N5I2 433 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 TXN2Q99757 166 aa10.53□□□□□ -0.72
SNX6-210ENST00000557341 UBE2CO00762 179 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 GNG7O60262 68 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 YIF1AO95070 293 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 GABARAPO95166 117 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 MT-CO2P00403 227 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.73
SNX6-210ENST00000557341 TBPP20226 339 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 AKR1C2P52895 323 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 HSPE1P61604 102 aaKnown RBP10.52□□□□□ -0.73
SNX6-210ENST00000557341 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
SNX6-210ENST00000557341 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 LHFPL1Q86WI0 220 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 WFDC3Q8IUB2 231 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 PINX1Q96BK5 328 aaKnown RBP10.52□□□□□ -0.73
SNX6-210ENST00000557341 OR10C1Q96KK4 312 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 NXF2Q9GZY0 626 aaKnown RBP10.52□□□□□ -0.73
SNX6-210ENST00000557341 EXTL2Q9UBQ6 330 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 KLK11Q9UBX7 282 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 SMPXQ9UHP9 88 aa10.52□□□□□ -0.73
SNX6-210ENST00000557341 KIR2DL5BA0A0G2JN68 375 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 KIR2DL5BA0A0G2JPC4 375 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 IGHV7-4-1A0A0J9YVY3 117 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 ATG12O94817 140 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 PI3P19957 117 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 BMI1P35226 326 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 PPP5CP53041 499 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 PIGPP57054 158 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 KIR2DL5AQ8N109 375 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 STPG3Q8N7X2 389 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 SLC35G3Q8N808 338 aa10.51□□□□□ -0.73
SNX6-210ENST00000557341 TMEM116Q8NCL8 245 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms