RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OVOL2Q9BRP0 275 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 C20orf24Q9BUV8 137 aa16.85■□□□□ 0.29
ACTN1-220ENST00000556433 DBX1A6NMT0 343 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 K7EIM0 57 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 TNFAIP8O95379 198 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 Q56UQ5 140 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 LAMTOR1Q6IAA8 161 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 SNX29P2Q8IUI4 249 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 SCPEP1Q9HB40 452 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 UBQLN2Q9UHD9 624 aa16.84■□□□□ 0.29
ACTN1-220ENST00000556433 IGHV3OR16-8A0A075B7F1 116 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 F8W735 103 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-220ENST00000556433 TSPAN4O14817 238 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 APOA1P02647 267 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 NCS1P62166 190 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 TBC1D26Q86UD7 250 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 CMTM3Q96MX0 182 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 TMEM14BQ9NUH8 114 aa16.83■□□□□ 0.28
ACTN1-220ENST00000556433 C15orf61A6NNL5 157 aa16.82■□□□□ 0.28
ACTN1-220ENST00000556433 ZNF207O43670 478 aaKnown RBP16.82■□□□□ 0.28
ACTN1-220ENST00000556433 ADMP35318 185 aa16.82■□□□□ 0.28
ACTN1-220ENST00000556433 FUNDC2Q9BWH2 189 aa16.82■□□□□ 0.28
ACTN1-220ENST00000556433 FAM212BQ9NTI7 297 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-220ENST00000556433 K7EMT4 169 aa16.81■□□□□ 0.28
ACTN1-220ENST00000556433 VBP1P61758 197 aa16.81■□□□□ 0.28
ACTN1-220ENST00000556433 H2BFWTQ7Z2G1 175 aa16.81■□□□□ 0.28
ACTN1-220ENST00000556433 OR1P1Q8NH06 330 aa16.81■□□□□ 0.28
ACTN1-220ENST00000556433 OR4A16Q8NH70 328 aa16.81■□□□□ 0.28
ACTN1-220ENST00000556433 CTSGP08311 255 aa16.8■□□□□ 0.28
ACTN1-220ENST00000556433 ELK1P19419 428 aa16.8■□□□□ 0.28
ACTN1-220ENST00000556433 RCVRNP35243 200 aa16.8■□□□□ 0.28
ACTN1-220ENST00000556433 UCP3P55916 312 aa16.8■□□□□ 0.28
ACTN1-220ENST00000556433 MISP3Q96FF7 219 aa16.8■□□□□ 0.28
ACTN1-220ENST00000556433 SEC22AQ96IW7 307 aa16.8■□□□□ 0.28
ACTN1-220ENST00000556433 HPGDSO60760 199 aa16.79■□□□□ 0.28
ACTN1-220ENST00000556433 IGKV1-39P01597 117 aa16.79■□□□□ 0.28
ACTN1-220ENST00000556433 IGKV1D-39P04432 117 aa16.79■□□□□ 0.28
ACTN1-220ENST00000556433 APOC4P55056 127 aa16.79■□□□□ 0.28
ACTN1-220ENST00000556433 OR4C46A6NHA9 309 aa16.78■□□□□ 0.28
ACTN1-220ENST00000556433 C15orf62A8K5M9 175 aa16.78■□□□□ 0.28
ACTN1-220ENST00000556433 NUPL2O15504 423 aaKnown RBP16.78■□□□□ 0.28
ACTN1-220ENST00000556433 CTSDP07339 412 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-220ENST00000556433 MFAP4P55083 255 aa16.78■□□□□ 0.28
ACTN1-220ENST00000556433 ODF3L2Q3SX64 289 aa16.78■□□□□ 0.28
ACTN1-220ENST00000556433 MRGPRFQ96AM1 343 aa16.78■□□□□ 0.28
ACTN1-220ENST00000556433 SMPXQ9UHP9 88 aa16.78■□□□□ 0.28
ACTN1-220ENST00000556433 I3L2K1 104 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 M0QYG6 137 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 SPRY2O43597 315 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 YIF1AO95070 293 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 RORCP51449 518 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 HSPE1P61604 102 aaKnown RBP16.77■□□□□ 0.28
ACTN1-220ENST00000556433 PRCDQ00LT1 54 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 RELQ04864 619 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-220ENST00000556433 Q6ZWC4 215 aa16.77■□□□□ 0.28
ACTN1-220ENST00000556433 HYDINQ4G0P3 5121 aa16.77■□□□□ 0.27
ACTN1-220ENST00000556433 EPPK1P58107 5090 aaKnown RBP16.76■□□□□ 0.27
ACTN1-220ENST00000556433 FAM25AB3EWG3 89 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 FAM25CB3EWG5 89 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 FAM25GB3EWG6 89 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 UBE2CO00762 179 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 WFDC3Q8IUB2 231 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 TXN2Q99757 166 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 RHPN1-AS1Q9BWJ2 59 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 TP53TG1Q9Y2A0 90 aa16.76■□□□□ 0.27
ACTN1-220ENST00000556433 PLECQ15149 4684 aaKnown RBP16.76■□□□□ 0.27
ACTN1-220ENST00000556433 IGHV7-4-1A0A0J9YVY3 117 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 A0A0J9YWU9 116 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 CHEK1O14757 476 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 MT-CO2P00403 227 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 IGHV3-48P01763 117 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 RPL35AP18077 110 aaKnown RBP16.75■□□□□ 0.27
ACTN1-220ENST00000556433 BMI1P35226 326 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 ERHP84090 104 aaKnown RBP16.75■□□□□ 0.27
ACTN1-220ENST00000556433 DEFB135Q30KP9 77 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 RNASE12Q5GAN4 147 aaKnown RBP16.75■□□□□ 0.27
ACTN1-220ENST00000556433 MZT2AQ6P582 158 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 STPG3Q8N7X2 389 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 TMEM116Q8NCL8 245 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 ZNF414Q96IQ9 312 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 RNF2Q99496 336 aa16.75■□□□□ 0.27
ACTN1-220ENST00000556433 IGHV3-49A0A0A0MS15 119 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 KIR2DL5BA0A0G2JN68 375 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 KIR2DL5BA0A0G2JPC4 375 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 PGAM2P15259 253 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 FCGR2BP31994 310 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-220ENST00000556433 IZUMO4Q1ZYL8 232 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 KIR2DL5AQ8N109 375 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 ZNF114Q8NC26 417 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 KIR2DL5BQ8NHK3 375 aa16.74■□□□□ 0.27
ACTN1-220ENST00000556433 PINX1Q96BK5 328 aaKnown RBP16.74■□□□□ 0.27
ACTN1-220ENST00000556433 NXF2Q9GZY0 626 aaKnown RBP16.74■□□□□ 0.27
ACTN1-220ENST00000556433 CXorf65A6NEN9 183 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 PI3P19957 117 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 SPINK9Q5DT21 86 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 LYG2Q86SG7 212 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 GALNT14Q96FL9 552 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 OR10C1Q96KK4 312 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 KLK11Q9UBX7 282 aa16.73■□□□□ 0.27
ACTN1-220ENST00000556433 TRAV14DV4A0A0A6YYC5 116 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms