RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RCHY1Q96PM5 261 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 SLC25A21Q9BQT8 299 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 ANKRD34BA5PLL1 514 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 NAP1L6A6NFF2 107 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 OVOL1O14753 267 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 REG1AP05451 166 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 DEFA4P12838 97 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 ZP3P21754 424 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 AKR1C2P52895 323 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 SLURP1P55000 103 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 CNPY1Q3B7I2 92 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 TRIQKQ629K1 86 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 FBXL7Q9UJT9 491 aa12.05□□□□□ -0.48
CHMP1A-206ENST00000549139 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 OR13C7P0DN81 318 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 WT1-ASQ06250 92 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 C15orf32Q32M92 178 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 C19orf35Q6ZS72 473 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 FAM219AQ8IW50 185 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 SELENOHQ8IZQ5 122 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 RBPMSQ93062 196 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 HINT2Q9BX68 163 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 BATF3Q9NR55 127 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 THYN1Q9P016 225 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 TMEM56-RWDD3S4R434 201 aa12.04□□□□□ -0.48
CHMP1A-206ENST00000549139 A0A0B4J293 547 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 CYB5BO43169 146 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 NDUFB8O95169 186 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 AKR1C4P17516 323 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 INSL3P51460 131 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 PRCDQ00LT1 54 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 EXOSC2Q13868 293 aaKnown RBP12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 TMEM187Q14656 261 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 IZUMO4Q1ZYL8 232 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 LHFPL5Q8TAF8 219 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 IL22RA2Q969J5 263 aa12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 C7orf50Q9BRJ6 194 aaKnown RBP12.03□□□□□ -0.48
CHMP1A-206ENST00000549139 TRBV12-3P01733 135 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 IL7P13232 177 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 MECP2P51608 486 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 SUPT4H1P63272 117 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 KLF5Q13887 457 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 RBMS2Q15434 407 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 OR1L6Q8NGR2 347 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 RNASE11Q8TAA1 199 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 CXorf58Q96LI9 332 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 ZNF256Q9Y2P7 627 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 DMRT1Q9Y5R6 373 aa12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 PLECQ15149 4684 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-206ENST00000549139 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 CENPXA8MT69 81 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 ANXA3P12429 323 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 SLC25A24Q6NUK1 477 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 ACSM6Q6P461 480 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 Q6ZRM9 215 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 S100ZQ8WXG8 99 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 CITED4Q96RK1 184 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 SMAD5-AS1Q9Y6J3 95 aa12.01□□□□□ -0.49
CHMP1A-206ENST00000549139 TRBV7-1A0A0A6YYK4 115 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 PIGBOS1A0A0B4J2F0 54 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 INS-IGF2F8WCM5 200 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 ST8SIA3O43173 380 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 CCR6P51684 374 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 ERHP84090 104 aaKnown RBP12□□□□□ -0.49
CHMP1A-206ENST00000549139 TATDN3Q17R31 274 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 RPEL1Q2QD12 228 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 AARDQ4LEZ3 155 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 TMED4Q7Z7H5 227 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 LGI3Q8N145 548 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 OR52E5Q8NH55 327 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 VN1R17PQ8TDU5 208 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 GPR146Q96CH1 333 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 PDCD10Q9BUL8 212 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 PALMDQ9NP74 551 aa12□□□□□ -0.49
CHMP1A-206ENST00000549139 CTNNBIP1Q9NSA3 81 aaPredicted RBP12□□□□□ -0.49
CHMP1A-206ENST00000549139 A0A0B4J2A0 478 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 BMPR1BO00238 502 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 NDUFB6O95139 128 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 IFNA17P01571 189 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 MFAP2P55001 183 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 SRPXP78539 464 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 ZFAND6Q6FIF0 208 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 CENPSQ8N2Z9 138 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 ZNF114Q8NC26 417 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 CCDC140Q96MF4 163 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms