RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 COX5BP10606 129 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 CCL11P51671 97 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 OR1C1Q15619 314 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 KRTCAP3Q53RY4 240 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 SPSB3Q6PJ21 355 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 ZNF841Q6ZN19 808 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 DRAM1Q8N682 238 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 ZNF525Q8N782 197 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 TMEM170AQ8WVE7 144 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 CORO2AQ92828 525 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 KCNS1Q96KK3 526 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 POM121L2Q96KW2 1035 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 CHRDL1Q9BU40 450 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 MCRIP2Q9BUT9 160 aaKnown RBP4.59□□□□□ -1.68
LIMA1-203ENST00000547825 ASCL3Q9NQ33 180 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 F11RQ9Y624 299 aaKnown RBP4.59□□□□□ -1.68
LIMA1-203ENST00000547825 UBR5O95071 2799 aaPredicted RBP4.59□□□□□ -1.68
LIMA1-203ENST00000547825 ZFHX2Q9C0A1 2572 aaPredicted RBP4.58□□□□□ -1.68
LIMA1-203ENST00000547825 TRBV24-1A0A075B6N3 115 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 IGHV3OR15-7A0A075B7D8 119 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 OR2H2O95918 312 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 NPY1RP25929 384 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 SSTR5P35346 364 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 LINC00205P59089 165 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 FGF12P61328 243 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 ARL16Q0P5N6 197 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 ACSF3Q4G176 576 aaPredicted RBP4.58□□□□□ -1.68
LIMA1-203ENST00000547825 BPIFA4PQ86YQ2 179 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 LIME1Q9H400 295 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 IL36GQ9NZH8 169 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 PIEZO1Q92508 2521 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 TENM4Q6N022 2769 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 MUC21A0A0G2JKD1 596 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 MUC21A0A140T8X8 626 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 EFNA2O43921 213 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 TMEM50AO95807 157 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 HAND1O96004 215 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 CGAP01215 116 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 HBZP02008 142 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 PRSS1P07477 247 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 LYL1P12980 280 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 UCP1P25874 307 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 HES1Q14469 280 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 LRRC75BQ2VPJ9 315 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 MUC21Q5SSG8 566 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 OR1B1Q8NGR6 318 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 OR10X1Q8NGY0 326 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 LRRC29Q8WV35 223 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 FAM168AQ92567 244 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 BCL2L2Q92843 193 aaPredicted RBP4.58□□□□□ -1.68
LIMA1-203ENST00000547825 C18orf12Q96KH6 178 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 TMEM8BA6NDV4 472 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 MPZP25189 248 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 LHX2P50458 406 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 UCP2P55851 309 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 SRSF4Q08170 494 aaKnown RBP4.58□□□□□ -1.68
LIMA1-203ENST00000547825 PRSS8Q16651 343 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 SMIM21Q3B7S5 101 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 CENPWQ5EE01 88 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 OCC1Q8TAD7 63 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 DCTN5Q9BTE1 182 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 MAP1LC3CQ9BXW4 147 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 IL19Q9UHD0 177 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 PLXNB1O43157 2135 aa4.58□□□□□ -1.68
LIMA1-203ENST00000547825 A0A0G2JRQ6 117 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 TEX50A0A1B0GTY4 177 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 ODAMA1E959 279 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 MARCH11A6NNE9 402 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 J3QR89 54 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 WNT9BO14905 357 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 NPIPB7O75200 414 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 LEPROTL1O95214 131 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 RBP4P02753 201 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 SFTPCP11686 197 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 PLP1P60201 277 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 QRFPP83859 136 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 PMCHL1Q16048 86 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 FAM90A2PQ658T7 463 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 DHRS13Q6UX07 377 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 FAM89BQ8N5H3 189 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 OR4D5Q8NGN0 318 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 C10orf35Q96D05 121 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 SRXN1Q9BYN0 137 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 CHRNA10Q9GZZ6 450 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 LPAR2Q9HBW0 351 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 A0A1W2PQM1 296 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 C17orf98A8MV24 154 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 PPIAL4DF5H284 164 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 RAMP3O60896 148 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 SMPD2O60906 423 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 ELANEP08246 267 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 LIFP15018 202 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 CFPP27918 469 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 MAGEA5P43359 124 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 TDGF1P3P51864 188 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 TRIP6Q15654 476 aaKnown RBP4.57□□□□□ -1.68
LIMA1-203ENST00000547825 RTL8BQ17RB0 113 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 C1orf194Q5T5A4 169 aa4.57□□□□□ -1.68
LIMA1-203ENST00000547825 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms