RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 TMEM14BQ9NUH8 114 aa10.75□□□□□ -0.69
COL2A1-209ENST00000546974 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
COL2A1-209ENST00000546974 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
COL2A1-209ENST00000546974 C15orf61A6NNL5 157 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 K7EIM0 57 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 NDUFA4O00483 81 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 RCVRNP35243 200 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 UCP3P55916 312 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 VBP1P61758 197 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 TBC1D26Q86UD7 250 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 SLC38A6Q8IZM9 456 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 OR2C3Q8N628 320 aa10.74□□□□□ -0.69
COL2A1-209ENST00000546974 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
COL2A1-209ENST00000546974 DAZ1Q9NQZ3 744 aaKnown RBP10.74□□□□□ -0.69
COL2A1-209ENST00000546974 IGHV3-21A0A0B4J1V1 117 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 DBX1A6NMT0 343 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
COL2A1-209ENST00000546974 K7EMT4 169 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 TSPAN4O14817 238 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 ELK1P19419 428 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 LAMTOR1Q6IAA8 161 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 SNX29P2Q8IUI4 249 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 OR1P1Q8NH06 330 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 SEC22AQ96IW7 307 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 CHRDL1Q9BU40 450 aa10.73□□□□□ -0.69
COL2A1-209ENST00000546974 HPGDSO60760 199 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 IGKV1-39P01597 117 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 IGKV1D-39P04432 117 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 ADMP35318 185 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 RORCP51449 518 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 Q56UQ5 140 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 H2BFWTQ7Z2G1 175 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 OR4A16Q8NH70 328 aa10.72□□□□□ -0.69
COL2A1-209ENST00000546974 C15orf62A8K5M9 175 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 CTSGP08311 255 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 FCGR2BP31994 310 aaPredicted RBP10.71□□□□□ -0.69
COL2A1-209ENST00000546974 MZT2AQ6P582 158 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 UBAC2Q8NBM4 344 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 ZNF114Q8NC26 417 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 OVOL2Q9BRP0 275 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 C20orf24Q9BUV8 137 aa10.71□□□□□ -0.69
COL2A1-209ENST00000546974 BIRC6Q9NR09 4857 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 MFAP4P55083 255 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 RND3P61587 244 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 HSPE1P61604 102 aaKnown RBP10.7□□□□□ -0.7
COL2A1-209ENST00000546974 PRCDQ00LT1 54 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
COL2A1-209ENST00000546974 MRGPRFQ96AM1 343 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 ZNF486Q96H40 463 aaPredicted RBP10.7□□□□□ -0.7
COL2A1-209ENST00000546974 TXN2Q99757 166 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 KMT2AQ03164 3969 aa10.7□□□□□ -0.7
COL2A1-209ENST00000546974 FAM25AB3EWG3 89 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 FAM25CB3EWG5 89 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 FAM25GB3EWG6 89 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 I3L2K1 104 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 M0QYG6 137 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 NUPL2O15504 423 aaKnown RBP10.69□□□□□ -0.7
COL2A1-209ENST00000546974 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
COL2A1-209ENST00000546974 JTBO76095 146 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 APOC4P55056 127 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 ERHP84090 104 aaKnown RBP10.69□□□□□ -0.7
COL2A1-209ENST00000546974 LHFPL1Q86WI0 220 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 AP3S1Q92572 193 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 KLK11Q9UBX7 282 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 UBQLN2Q9UHD9 624 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
COL2A1-209ENST00000546974 IGHV3OR16-8A0A075B7F1 116 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 OR4C46A6NHA9 309 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 UBE2CO00762 179 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 Q6ZWC4 215 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 WFDC3Q8IUB2 231 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 ARRDC1Q8N5I2 433 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 ZNF414Q96IQ9 312 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 OR10C1Q96KK4 312 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
COL2A1-209ENST00000546974 KIR2DL5BA0A0G2JN68 375 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 KIR2DL5BA0A0G2JPC4 375 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 IGHV7-4-1A0A0J9YVY3 117 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 GABARAPO95166 117 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 MT-CO2P00403 227 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 CTSDP07339 412 aaPredicted RBP10.67□□□□□ -0.7
COL2A1-209ENST00000546974 PGAM2P15259 253 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 ZNF182P17025 639 aaPredicted RBP10.67□□□□□ -0.7
COL2A1-209ENST00000546974 TBPP20226 339 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 PIGPP57054 158 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 CTF1Q16619 201 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 RNASE10Q5GAN6 216 aaKnown RBP10.67□□□□□ -0.7
COL2A1-209ENST00000546974 KIR2DL5AQ8N109 375 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 OR52I2Q8NH67 350 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 KIR2DL5BQ8NHK3 375 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 NXF2Q9GZY0 626 aaKnown RBP10.67□□□□□ -0.7
COL2A1-209ENST00000546974 NAA50Q9GZZ1 169 aaKnown RBP10.67□□□□□ -0.7
COL2A1-209ENST00000546974 MTFP1Q9UDX5 166 aa10.67□□□□□ -0.7
COL2A1-209ENST00000546974 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 CHEK1O14757 476 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 SPRY2O43597 315 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 ATG12O94817 140 aa10.66□□□□□ -0.7
COL2A1-209ENST00000546974 CD3DP04234 171 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms