RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TMEM190Q8WZ59 177 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 ZNF486Q96H40 463 aaPredicted RBP7.03□□□□□ -1.28
YBX3-218ENST00000546298 SPAG8Q99932 426 aaPredicted RBP7.03□□□□□ -1.28
YBX3-218ENST00000546298 DAZ1Q9NQZ3 744 aaKnown RBP7.03□□□□□ -1.28
YBX3-218ENST00000546298 TMEM14BQ9NUH8 114 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 RBMY1BA6NDE4 496 aaKnown RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 RBMY1EA6NEQ0 496 aaKnown RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 OR2T8A6NH00 312 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 K7EMT4 169 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 NUPL2O15504 423 aaKnown RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 RBMY1DP0C7P1 496 aaKnown RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 MFAP4P55083 255 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 HSPE1P61604 102 aaKnown RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 ERHP84090 104 aaKnown RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 RELQ04864 619 aaPredicted RBP7.02□□□□□ -1.29
YBX3-218ENST00000546298 ARRDC1Q8N5I2 433 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 OR2C3Q8N628 320 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 UBAC2Q8NBM4 344 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 SEC22AQ96IW7 307 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 TXN2Q99757 166 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 C20orf24Q9BUV8 137 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 GGTLC1Q9BX51 225 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
YBX3-218ENST00000546298 IGHV3-21A0A0B4J1V1 117 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 LCE6AA0A183 80 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 OR4C46A6NHA9 309 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 K7EIM0 57 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 M0QYG6 137 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 TSPAN4O14817 238 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 GABARAPO95166 117 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 MFAP2P55001 183 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 CMC4P56277 68 aaPredicted RBP7.01□□□□□ -1.29
YBX3-218ENST00000546298 RND3P61587 244 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 PRCDQ00LT1 54 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 CTF1Q16619 201 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 GPR107Q5VW38 600 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 CCDC71LQ8N9Z2 235 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 ZFAND1Q8TCF1 268 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 MRGPRFQ96AM1 343 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 MISP3Q96FF7 219 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 CHRDL1Q9BU40 450 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 WFDC10AQ9H1F0 79 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 RETNQ9HD89 108 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 COPZ2Q9P299 210 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 EXTL2Q9UBQ6 330 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 MTFP1Q9UDX5 166 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 SELENOKQ9Y6D0 94 aa7.01□□□□□ -1.29
YBX3-218ENST00000546298 C15orf62A8K5M9 175 aa7□□□□□ -1.29
YBX3-218ENST00000546298 GNG7O60262 68 aa7□□□□□ -1.29
YBX3-218ENST00000546298 B3GALNT1O75752 331 aa7□□□□□ -1.29
YBX3-218ENST00000546298 YIF1AO95070 293 aa7□□□□□ -1.29
YBX3-218ENST00000546298 CD3DP04234 171 aa7□□□□□ -1.29
YBX3-218ENST00000546298 CTSGP08311 255 aa7□□□□□ -1.29
YBX3-218ENST00000546298 FCGR2BP31994 310 aaPredicted RBP7□□□□□ -1.29
YBX3-218ENST00000546298 BMI1P35226 326 aa7□□□□□ -1.29
YBX3-218ENST00000546298 ADMP35318 185 aa7□□□□□ -1.29
YBX3-218ENST00000546298 SNCAP37840 140 aa7□□□□□ -1.29
YBX3-218ENST00000546298 NPBWR1P48145 328 aa7□□□□□ -1.29
YBX3-218ENST00000546298 AKR1C2P52895 323 aa7□□□□□ -1.29
YBX3-218ENST00000546298 APOC4P55056 127 aa7□□□□□ -1.29
YBX3-218ENST00000546298 PIGPP57054 158 aa7□□□□□ -1.29
YBX3-218ENST00000546298 TAS2R19P59542 299 aa7□□□□□ -1.29
YBX3-218ENST00000546298 MRPS10P82664 201 aaKnown RBP7□□□□□ -1.29
YBX3-218ENST00000546298 SSBP1Q04837 148 aaKnown RBP7□□□□□ -1.29
YBX3-218ENST00000546298 RNASE12Q5GAN4 147 aaKnown RBP7□□□□□ -1.29
YBX3-218ENST00000546298 GPR141Q7Z602 305 aa7□□□□□ -1.29
YBX3-218ENST00000546298 LHFPL1Q86WI0 220 aa7□□□□□ -1.29
YBX3-218ENST00000546298 ZNF114Q8NC26 417 aa7□□□□□ -1.29
YBX3-218ENST00000546298 OR52I2Q8NH67 350 aa7□□□□□ -1.29
YBX3-218ENST00000546298 TERB2Q8NHR7 220 aa7□□□□□ -1.29
YBX3-218ENST00000546298 FAM110AQ9BQ89 295 aa7□□□□□ -1.29
YBX3-218ENST00000546298 PDCD10Q9BUL8 212 aa7□□□□□ -1.29
YBX3-218ENST00000546298 NAA50Q9GZZ1 169 aaKnown RBP7□□□□□ -1.29
YBX3-218ENST00000546298 KLK11Q9UBX7 282 aa7□□□□□ -1.29
YBX3-218ENST00000546298 C3orf85A0A1B0GTC6 90 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 DBX1A6NMT0 343 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 I3L2K1 104 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 UBE2CO00762 179 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 RGS5O15539 181 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 JTBO76095 146 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 RAB3DO95716 219 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 MT-CO2P00403 227 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 IGKV1-39P01597 117 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 CD74P04233 296 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 IGKV1D-39P04432 117 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 CD5P06127 495 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 SUB1P53999 127 aaKnown RBP eCLIP6.99□□□□□ -1.29
YBX3-218ENST00000546298 TRIM16LQ309B1 348 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 SLC35G3Q8N808 338 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 TMEM229BQ8NBD8 167 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 DUSP18Q8NEJ0 188 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 RRNAD1Q96FB5 475 aaKnown RBP6.99□□□□□ -1.29
YBX3-218ENST00000546298 ABHD1Q96SE0 405 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 GINS3Q9BRX5 216 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 RHPN1-AS1Q9BWJ2 59 aa6.99□□□□□ -1.29
YBX3-218ENST00000546298 MRPS26Q9BYN8 205 aaKnown RBP6.99□□□□□ -1.29
YBX3-218ENST00000546298 C6orf62Q9GZU0 229 aaPredicted RBP6.99□□□□□ -1.29
YBX3-218ENST00000546298 ENY2Q9NPA8 101 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms