RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TNFAIP8O95379 198 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 ELLP55199 621 aaPredicted RBP8.83□□□□□ -1
GABPB1-206ENST00000543881 VBP1P61758 197 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 CNPY1Q3B7I2 92 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 SLC16A13Q7RTY0 426 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 HSD17B13Q7Z5P4 300 aaPredicted RBP8.83□□□□□ -1
GABPB1-206ENST00000543881 CMTM1Q8IZ96 169 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 SCARB1Q8WTV0 552 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
GABPB1-206ENST00000543881 MARC2Q969Z3 335 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 CHRDL1Q9BU40 450 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 PTTG2Q9NZH5 202 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 MRPL27Q9P0M9 148 aaKnown RBP8.83□□□□□ -1
GABPB1-206ENST00000543881 UFC1Q9Y3C8 167 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 K7EIM0 57 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 IGKV1-39P01597 117 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 APOA1P02647 267 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 IGKV1D-39P04432 117 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 ELK1P19419 428 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 ADMP35318 185 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 TBC1D26Q86UD7 250 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 SNX29P2Q8IUI4 249 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 TMEM14BQ9NUH8 114 aa8.83□□□□□ -1
GABPB1-206ENST00000543881 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 IGHV3OR16-8A0A075B7F1 116 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 TRAV25A0A0B4J276 109 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 C15orf61A6NNL5 157 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 HPGDSO60760 199 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 SNAPC5O75971 98 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 TSPAN5P62079 268 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 CEMP1Q6PRD7 247 aaPredicted RBP8.82□□□□□ -1
GABPB1-206ENST00000543881 BSCL2Q96G97 398 aaPredicted RBP8.82□□□□□ -1
GABPB1-206ENST00000543881 SEC22AQ96IW7 307 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 CMTM3Q96MX0 182 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 GGTLC1Q9BX51 225 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 C5orf66Q9H5L9 145 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 SCPEP1Q9HB40 452 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 C21orf62Q9NYP8 219 aa8.82□□□□□ -1
GABPB1-206ENST00000543881 CYB5BO43169 146 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 ZNF207O43670 478 aaKnown RBP8.81□□□□□ -1
GABPB1-206ENST00000543881 DEDDO75618 318 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 RCVRNP35243 200 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 SPCS2Q15005 226 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 ANKRD55Q3KP44 614 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 RBPMS2Q6ZRY4 209 aaKnown RBP8.81□□□□□ -1
GABPB1-206ENST00000543881 OR1L6Q8NGR2 347 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 OR5B3Q8NH48 314 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 NAA50Q9GZZ1 169 aaKnown RBP8.81□□□□□ -1
GABPB1-206ENST00000543881 DAZ1Q9NQZ3 744 aaKnown RBP8.81□□□□□ -1
GABPB1-206ENST00000543881 FAM212BQ9NTI7 297 aaPredicted RBP8.81□□□□□ -1
GABPB1-206ENST00000543881 PRNDQ9UKY0 176 aa8.81□□□□□ -1
GABPB1-206ENST00000543881 RYR1P21817 5038 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
GABPB1-206ENST00000543881 M0QYG6 137 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 NDUFA4O00483 81 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 TSPAN4O14817 238 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 CTSGP08311 255 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 UCP3P55916 312 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 LPCAT3Q6P1A2 487 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 SPSB3Q6PJ21 355 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 OR2C3Q8N628 320 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 UBAC2Q8NBM4 344 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 MRGPRFQ96AM1 343 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 TMEM56Q96MV1 263 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 ATP6V0BQ99437 205 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 SPAG8Q99932 426 aaPredicted RBP8.8□□□□□ -1
GABPB1-206ENST00000543881 C20orf24Q9BUV8 137 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 FKBP11Q9NYL4 201 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 UBQLN2Q9UHD9 624 aa8.8□□□□□ -1
GABPB1-206ENST00000543881 A0A0J9YWU9 116 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 I3L2K1 104 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 HNRNPCP07910 306 aaKnown RBP eCLIP8.79□□□□□ -1
GABPB1-206ENST00000543881 EWSR1Q01844 656 aaKnown RBP eCLIP8.79□□□□□ -1
GABPB1-206ENST00000543881 IZUMO4Q1ZYL8 232 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 Q56UQ5 140 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 RNASE12Q5GAN4 147 aaKnown RBP8.79□□□□□ -1
GABPB1-206ENST00000543881 SLC38A6Q8IZM9 456 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 OR1P1Q8NH06 330 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 GATAD1Q8WUU5 269 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 KLK11Q9UBX7 282 aa8.79□□□□□ -1
GABPB1-206ENST00000543881 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
GABPB1-206ENST00000543881 K7EMT4 169 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 IGHV3-48P01763 117 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 SMIM18P0DKX4 95 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 PI3P19957 117 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 RORCP51449 518 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 PRCDQ00LT1 54 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 CTF1Q16619 201 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 H2BFWTQ7Z2G1 175 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 LHFPL1Q86WI0 220 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 MISP3Q96FF7 219 aa8.78□□□□□ -1
GABPB1-206ENST00000543881 C15orf62A8K5M9 175 aa8.77□□□□□ -1
GABPB1-206ENST00000543881 IGKV1-5P01602 117 aa8.77□□□□□ -1
GABPB1-206ENST00000543881 S100GP29377 79 aa8.77□□□□□ -1
GABPB1-206ENST00000543881 HSPE1P61604 102 aaKnown RBP8.77□□□□□ -1
GABPB1-206ENST00000543881 TNFRSF9Q07011 255 aa8.77□□□□□ -1
GABPB1-206ENST00000543881 NDUFA5Q16718 116 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms