RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 PDLIM3Q53GG5 364 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 ETV3LQ6ZN32 361 aa13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 OR52B4Q8NGK2 314 aa13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 MITD1Q8WV92 249 aa13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 OR5B12Q96R08 314 aa13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 CACFD1Q9UGQ2 172 aa13.26□□□□□ -0.29
RABGGTA-203ENST00000543002 IGLV11-55A0A075B6I3 123 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 OR2J3O76001 311 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 IGHV3-11P01762 117 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 HOXB5P09067 269 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 LGALS1P09382 135 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 SLC25A6P12236 298 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 MYCNOSP40205 109 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 ERHP84090 104 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 DEFA5Q01523 94 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 SPINK9Q5DT21 86 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 PLET1Q6UQ28 207 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 TREML4Q6UXN2 200 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 OR2C3Q8N628 320 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 RAX2Q96IS3 184 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-203ENST00000543002 CCL24O00175 119 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 CYB5BO43169 146 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 PF4P02776 101 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 IL5P05113 134 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 GGNBP1Q5YKI7 109 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 ZNF431Q8TF32 576 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 P2RX4Q99571 388 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 SEC22CQ9BRL7 303 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 FBXL7Q9UJT9 491 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
RABGGTA-203ENST00000543002 PKD1L1Q8TDX9 2849 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 PITX3O75364 302 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 ADAP1O75689 374 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 NDUFB8O95169 186 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 C15orf32Q32M92 178 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 OR1P1Q8NH06 330 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 OR1S1Q8NH92 325 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 DUX3Q96PT4 197 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 MARVELD1Q9BSK0 173 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 ENY2Q9NPA8 101 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 TRRAPQ9Y4A5 3859 aa13.23□□□□□ -0.29
RABGGTA-203ENST00000543002 INMT-MINDY4F8WBC2 141 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 IFNA21P01568 189 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 MFAP2P55001 183 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 TNFRSF9Q07011 255 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 FHL3Q13643 280 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 SLC25A24Q6NUK1 477 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 OR1N2Q8NGR9 330 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 THYN1Q9P016 225 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 HSPB7Q9UBY9 170 aa13.22□□□□□ -0.29
RABGGTA-203ENST00000543002 NXPH3O95157 252 aa13.21□□□□□ -0.29
RABGGTA-203ENST00000543002 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-203ENST00000543002 SNCAP37840 140 aa13.21□□□□□ -0.29
RABGGTA-203ENST00000543002 ZNF616Q08AN1 781 aa13.21□□□□□ -0.29
RABGGTA-203ENST00000543002 EXOSC2Q13868 293 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-203ENST00000543002 LINC00482Q8N8I6 264 aa13.21□□□□□ -0.29
RABGGTA-203ENST00000543002 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 A0A087WW49 117 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 CEBPZOSA8MTT3 80 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 PRAF2O60831 178 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 PTTG1O95997 202 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 C12orf45Q8N5I9 185 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 DPF1Q92782 380 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 CXorf58Q96LI9 332 aa13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 GPN1Q9HCN4 374 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 RANGRFQ9HD47 186 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-203ENST00000543002 ANKRD34BA5PLL1 514 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 FAM90A26D6RGX4 464 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 LINC01619G3V211 115 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 OR8U8P0C7N1 319 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 RNASE2P10153 161 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 SPNP16150 400 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 DCTN2Q13561 401 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 BSXQ3C1V8 233 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 EEF1AKMT3Q96AZ1 226 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 RBKSQ9H477 322 aa13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 HEYLQ9NQ87 328 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-203ENST00000543002 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 MFSD2BA6NFX1 497 aa13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 SNRPGP15A8MWD9 76 aa13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 PVRIGQ6DKI7 326 aa13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 UXS1Q8NBZ7 420 aa13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 VN1R17PQ8TDU5 208 aa13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms