RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 FAM206AQ9NX38 181 aa2.54□□□□□ -2
CD44-217ENST00000525348 IL36GQ9NZH8 169 aa2.54□□□□□ -2
CD44-217ENST00000525348 UQCR10Q9UDW1 63 aa2.54□□□□□ -2
CD44-217ENST00000525348 LINC00312Q9Y6C7 94 aa2.54□□□□□ -2
CD44-217ENST00000525348 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 DOCK2Q92608 1830 aa2.54□□□□□ -2
CD44-217ENST00000525348 NRXN2Q9P2S2 1712 aa2.54□□□□□ -2
CD44-217ENST00000525348 A0A0B4J2A0 478 aa2.53□□□□□ -2
CD44-217ENST00000525348 TMEM235A6NFC5 223 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR51F1A6NGY5 319 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR2T8A6NH00 312 aa2.53□□□□□ -2
CD44-217ENST00000525348 TMEM212A6NML5 194 aa2.53□□□□□ -2
CD44-217ENST00000525348 CEACAM18A8MTB9 384 aa2.53□□□□□ -2
CD44-217ENST00000525348 C9JQL5 133 aa2.53□□□□□ -2
CD44-217ENST00000525348 M0R2Z0 102 aa2.53□□□□□ -2
CD44-217ENST00000525348 PLPP1O14494 284 aa2.53□□□□□ -2
CD44-217ENST00000525348 TAPBPO15533 448 aa2.53□□□□□ -2
CD44-217ENST00000525348 MPDU1O75352 247 aa2.53□□□□□ -2
CD44-217ENST00000525348 CLDN11O75508 207 aa2.53□□□□□ -2
CD44-217ENST00000525348 TOXO94900 526 aa2.53□□□□□ -2
CD44-217ENST00000525348 CATP04040 527 aaKnown RBP2.53□□□□□ -2
CD44-217ENST00000525348 IGLC2P0DOY2 106 aa2.53□□□□□ -2
CD44-217ENST00000525348 IGLC3P0DOY3 106 aa2.53□□□□□ -2
CD44-217ENST00000525348 ZNF708P17019 499 aa2.53□□□□□ -2
CD44-217ENST00000525348 IGFBP3P17936 291 aaPredicted RBP2.53□□□□□ -2
CD44-217ENST00000525348 CNTFRP26992 372 aa2.53□□□□□ -2
CD44-217ENST00000525348 TNFSF9P41273 254 aa2.53□□□□□ -2
CD44-217ENST00000525348 LHX2P50458 406 aa2.53□□□□□ -2
CD44-217ENST00000525348 UBE2NP61088 152 aaKnown RBP2.53□□□□□ -2
CD44-217ENST00000525348 GRB2P62993 217 aaKnown RBP2.53□□□□□ -2
CD44-217ENST00000525348 HIST1H3AP68431 136 aa2.53□□□□□ -2
CD44-217ENST00000525348 H3F3AP84243 136 aa2.53□□□□□ -2
CD44-217ENST00000525348 LAMTOR4Q0VGL1 99 aa2.53□□□□□ -2
CD44-217ENST00000525348 ACOT6Q3I5F7 207 aaPredicted RBP2.53□□□□□ -2
CD44-217ENST00000525348 Q6P435 159 aa2.53□□□□□ -2
CD44-217ENST00000525348 HRCT1Q6UXD1 115 aa2.53□□□□□ -2
CD44-217ENST00000525348 TMEM184AQ6ZMB5 413 aa2.53□□□□□ -2
CD44-217ENST00000525348 ACOT1Q86TX2 421 aa2.53□□□□□ -2
CD44-217ENST00000525348 PPP1R27Q86WC6 154 aa2.53□□□□□ -2
CD44-217ENST00000525348 EXOC3-AS1Q8N2X6 119 aa2.53□□□□□ -2
CD44-217ENST00000525348 RNF175Q8N4F7 328 aa2.53□□□□□ -2
CD44-217ENST00000525348 TTC9CQ8N5M4 171 aa2.53□□□□□ -2
CD44-217ENST00000525348 DEFB125Q8N687 156 aa2.53□□□□□ -2
CD44-217ENST00000525348 DEFB123Q8N688 67 aa2.53□□□□□ -2
CD44-217ENST00000525348 CLDN19Q8N6F1 224 aa2.53□□□□□ -2
CD44-217ENST00000525348 PRELID2Q8N945 189 aa2.53□□□□□ -2
CD44-217ENST00000525348 GPR26Q8NDV2 337 aa2.53□□□□□ -2
CD44-217ENST00000525348 ZNF740Q8NDX6 193 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR51A4Q8NGJ6 313 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR2K2Q8NGT1 345 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR6K6Q8NGW6 343 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR4A5Q8NH83 315 aa2.53□□□□□ -2
CD44-217ENST00000525348 PIFOQ8TCI5 191 aa2.53□□□□□ -2
CD44-217ENST00000525348 PSMF1Q92530 271 aa2.53□□□□□ -2
CD44-217ENST00000525348 PPCDCQ96CD2 204 aa2.53□□□□□ -2
CD44-217ENST00000525348 DERL3Q96Q80 235 aa2.53□□□□□ -2
CD44-217ENST00000525348 OR4C12Q96R67 309 aa2.53□□□□□ -2
CD44-217ENST00000525348 ATP5SQ99766 215 aa2.53□□□□□ -2
CD44-217ENST00000525348 MRPL45Q9BRJ2 306 aaKnown RBP2.53□□□□□ -2
CD44-217ENST00000525348 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
CD44-217ENST00000525348 SLC25A39Q9BZJ4 359 aaPredicted RBP2.53□□□□□ -2
CD44-217ENST00000525348 OR2H1Q9GZK4 316 aa2.53□□□□□ -2
CD44-217ENST00000525348 TMEM222Q9H0R3 208 aa2.53□□□□□ -2
CD44-217ENST00000525348 SH3BGRL3Q9H299 93 aa2.53□□□□□ -2
CD44-217ENST00000525348 VSIRQ9H7M9 311 aa2.53□□□□□ -2
CD44-217ENST00000525348 FGF20Q9NP95 211 aaPredicted RBP2.53□□□□□ -2
CD44-217ENST00000525348 KCNJ16Q9NPI9 418 aa2.53□□□□□ -2
CD44-217ENST00000525348 ACOT13Q9NPJ3 140 aa2.53□□□□□ -2
CD44-217ENST00000525348 CISHQ9NSE2 258 aa2.53□□□□□ -2
CD44-217ENST00000525348 SHPKQ9UHJ6 478 aa2.53□□□□□ -2
CD44-217ENST00000525348 CYSLTR1Q9Y271 337 aa2.53□□□□□ -2
CD44-217ENST00000525348 BTRCQ9Y297 605 aa2.53□□□□□ -2
CD44-217ENST00000525348 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
CD44-217ENST00000525348 KIF26AQ9ULI4 1882 aaPredicted RBP2.53□□□□□ -2
CD44-217ENST00000525348 SIPA1L3O60292 1781 aaPredicted RBP2.53□□□□□ -2
CD44-217ENST00000525348 LAMB1P07942 1786 aa2.53□□□□□ -2
CD44-217ENST00000525348 COL4A5P29400 1685 aa2.53□□□□□ -2
CD44-217ENST00000525348 NUP205Q92621 2012 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ATAD5Q96QE3 1844 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 A0A087WWC5 75 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 FAM236DA0A1B0GTK5 79 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 DUXBA0A1W2PPF3 345 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 C7orf71A4D174 169 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 H3BMH7 237 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 K7EP34 96 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 K7EPK0 472 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CDC42EP2O14613 210 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CD5LO43866 347 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 HYPMO75409 117 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SOX14O95416 240 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR2H2O95918 312 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CA1P00915 261 aaPredicted RBP2.52□□□□□ -2.01
CD44-217ENST00000525348 HRASP01112 189 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 KRASP01116 189 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CD8AP01732 235 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 TRGC2P03986 189 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 IGKV3-11P04433 115 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SPINK8P0C7L1 97 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SFTA3P0C7M3 94 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 PGA4P0DJD7 388 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms