RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 OR51H1Q8NH63 302 aa10.7□□□□□ -0.7
CSTF3-204ENST00000524556 LSM10Q969L4 123 aaKnown RBP10.7□□□□□ -0.7
CSTF3-204ENST00000524556 DGCR14Q96DF8 476 aaKnown RBP10.7□□□□□ -0.7
CSTF3-204ENST00000524556 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
CSTF3-204ENST00000524556 AGRNO00468 2067 aa10.7□□□□□ -0.7
CSTF3-204ENST00000524556 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 TRAV14DV4A0A0A6YYC5 116 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 SMIM30A4D0T7 59 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 EBAG9O00559 213 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 YIF1AO95070 293 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
CSTF3-204ENST00000524556 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 HLA-DMBP28068 263 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
CSTF3-204ENST00000524556 ZNF818PQ6ZRF7 136 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 BEST4Q8NFU0 473 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 HINT2Q9BX68 163 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 NDUFB11Q9NX14 153 aa10.69□□□□□ -0.7
CSTF3-204ENST00000524556 IGHV3OR16-13A0A075B7E8 117 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 IGHV3-74A0A0B4J1X5 117 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 NOTOA8MTQ0 251 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 NUPL2O15504 423 aaKnown RBP10.68□□□□□ -0.7
CSTF3-204ENST00000524556 CD5P06127 495 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 FXYD4P59646 89 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 ERVK-16P61578 105 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 AADACL3Q5VUY0 350 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 LEMD1Q68G75 181 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 C22orf42Q6IC83 251 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 ZNF367Q7RTV3 350 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 HOGA1Q86XE5 327 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 OR51B2Q9Y5P1 312 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 HSPG2P98160 4391 aa10.68□□□□□ -0.7
CSTF3-204ENST00000524556 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 PRSS29PA6NIE9 313 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 MARCH11A6NNE9 402 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 DFFBO76075 338 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-204ENST00000524556 MFAP4P55083 255 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 DEFB131AP59861 70 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 TBCEQ15813 527 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-204ENST00000524556 Q6ZTC4 211 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 CADM3Q8N126 398 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 OR1P1Q8NH06 330 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 TXN2Q99757 166 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 NXF2Q9GZY0 626 aaKnown RBP10.67□□□□□ -0.7
CSTF3-204ENST00000524556 MS4A6AQ9H2W1 248 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 NSG2Q9Y328 171 aa10.67□□□□□ -0.7
CSTF3-204ENST00000524556 I3L2K1 104 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 DNASE2O00115 360 aaPredicted RBP10.66□□□□□ -0.7
CSTF3-204ENST00000524556 RTL8CO15255 209 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 SNAPC5O75971 98 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 MIFP14174 115 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 STHQ8IWL8 128 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 GIMAP1Q8WWP7 306 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 SLC25A46Q96AG3 418 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 TMEM56Q96MV1 263 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 RNF126Q9BV68 326 aa10.66□□□□□ -0.7
CSTF3-204ENST00000524556 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 F2RP25116 425 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 GNRHRP30968 328 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 AQP4P55087 323 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 LILRB2Q8N423 598 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 POM121L12Q8N7R1 296 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 LGALS14Q8TCE9 139 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 ST8SIA2Q92186 375 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 DAPK2Q9UIK4 370 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
CSTF3-204ENST00000524556 TRAV18A0A075B6X5 111 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
CSTF3-204ENST00000524556 DBX1A6NMT0 343 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 ZNF705EA8MWA4 302 aaPredicted RBP10.64□□□□□ -0.71
CSTF3-204ENST00000524556 ST8SIA3O43173 380 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 KRASP01116 189 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 APOHP02749 345 aaPredicted RBP10.64□□□□□ -0.71
CSTF3-204ENST00000524556 EIF4EP06730 217 aaKnown RBP10.64□□□□□ -0.71
CSTF3-204ENST00000524556 G6PCP35575 357 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 LPAR6P43657 344 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 TMEM41BQ5BJD5 291 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 CENPSQ8N2Z9 138 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 FCAMRQ8WWV6 532 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 BORCS5Q969J3 196 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 MISP3Q96FF7 219 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 GINS3Q9BRX5 216 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 FKBP11Q9NYL4 201 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 X6R8D5 127 aa10.64□□□□□ -0.71
CSTF3-204ENST00000524556 PGLYRP1O75594 196 aaPredicted RBP10.63□□□□□ -0.71
CSTF3-204ENST00000524556 IGHV3-48P01763 117 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 RLN1P04808 185 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 FCER2P06734 321 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 P0DMU3 169 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms