RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PAX9P55771 341 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 SRSF4Q08170 494 aaKnown RBP7.41□□□□□ -1.22
SDCBP-212ENST00000523483 EBI3Q14213 229 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 ETV3LQ6ZN32 361 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 SLC35E3Q7Z769 313 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 OR8H1Q8NGG4 311 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 OR5R1Q8NH85 324 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 OR4C12Q96R67 309 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 NDUFA4L2Q9NRX3 87 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 LYRM2Q9NU23 88 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-212ENST00000523483 WNK1Q9H4A3 2382 aa7.41□□□□□ -1.22
SDCBP-212ENST00000523483 RNF222A6NCQ9 220 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 A6NDX4 124 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 OPRK1P41145 380 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 DYNLT3P51808 116 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 ZNF562Q6V9R5 426 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 ZNF329Q86UD4 541 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 C9orf62Q8N4C0 152 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 ZNF418Q8TF45 676 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-212ENST00000523483 SLC25A31Q9H0C2 315 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 FBXL17Q9UF56 701 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 ZNF257Q9Y2Q1 563 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 A0A1W2PN81 502 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 CRYGBP07316 175 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 CHRNA7P36544 502 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 P2RY1P47900 373 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 TMUB2Q71RG4 321 aa7.4□□□□□ -1.22
SDCBP-212ENST00000523483 DNAJC9-AS1A6NH13 148 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 CGB1A6NKQ9 187 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 CRYBA1P05813 215 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 SLC25A4P12235 298 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 S100A11P31949 105 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 RAB11AP62491 216 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 SSBP2P81877 361 aaPredicted RBP7.4□□□□□ -1.23
SDCBP-212ENST00000523483 MRGPRG-AS1Q2M3A8 158 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 HSD17B11Q8NBQ5 300 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 OR10P1Q8NGE3 313 aa7.4□□□□□ -1.23
SDCBP-212ENST00000523483 AMY1AP04745 511 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 RPP30P78346 268 aaKnown RBP7.39□□□□□ -1.23
SDCBP-212ENST00000523483 SCGB2A2Q13296 93 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 MLANAQ16655 118 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 OR52E5Q8NH55 327 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 ACY3Q96HD9 319 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 UBE2L5PA0A1B0GUS4 154 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 SLC38A11Q08AI6 406 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 OPCMLQ14982 345 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 LAMTOR1Q6IAA8 161 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 MRPL41Q8IXM3 137 aaKnown RBP7.39□□□□□ -1.23
SDCBP-212ENST00000523483 SMIM8Q96KF7 97 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 WNT10AQ9GZT5 417 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 IGLC7A0M8Q6 106 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 HMSDA8MTL9 139 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 FBXO24O75426 580 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 HLA-DRB1P01911 266 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 VDAC2P45880 294 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-212ENST00000523483 SULT1A1P50225 295 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 HBG1P69891 147 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 HBG2P69892 147 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 AKR1C1Q04828 323 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 ARL16Q0P5N6 197 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 OR1S2Q8NGQ3 325 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 P2RX4Q99571 388 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 ESM1Q9NQ30 184 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 U3KQ87 197 aa7.39□□□□□ -1.23
SDCBP-212ENST00000523483 C15orf62A8K5M9 175 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 HTR2BP41595 481 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 SUB1P53999 127 aaKnown RBP eCLIP7.38□□□□□ -1.232e-6■■■■□ 20.8
SDCBP-212ENST00000523483 OR2F1Q13607 317 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 RPL7L1Q6DKI1 246 aaKnown RBP7.38□□□□□ -1.23
SDCBP-212ENST00000523483 C9orf139Q6ZV77 190 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 PPP1R14BQ96C90 147 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 TEX22C9J3V5 150 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 M0QZK8 103 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 HAX1O00165 279 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 FGF16O43320 207 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 OR2J3O76001 311 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 MAS1LP35410 378 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 KHDC1LQ5JSQ8 128 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 HIST2H2BDQ6DRA6 164 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 TMEM65Q6PI78 240 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 C11orf44Q8N8P7 122 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 AQP10Q96PS8 301 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 ARPC5LQ9BPX5 153 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 CACFD1Q9UGQ2 172 aa7.38□□□□□ -1.23
SDCBP-212ENST00000523483 A0A0D9SG52 128 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 PF4V1P10720 104 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 FOSL1P15407 271 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 BAXQ07812 192 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 TRAV41A0A0B4J266 112 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 RNASE2P10153 161 aaKnown RBP7.37□□□□□ -1.23
SDCBP-212ENST00000523483 RUNX1Q01196 453 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 AANATQ16613 207 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 KCNRGQ8N5I3 272 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
SDCBP-212ENST00000523483 PCNPQ8WW12 178 aaKnown RBP7.37□□□□□ -1.23
SDCBP-212ENST00000523483 OR5B12Q96R08 314 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms