RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GABARAPH6UMI1 98 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 M0R2Z0 102 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TAX1BP3O14907 124 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 RBFOX2O43251 390 aaKnown RBP eCLIP2.69□□□□□ -1.982e-14■■■■■ 49.8
SKP1-209ENST00000522552 GNG7O60262 68 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 PGLYRP1O75594 196 aaPredicted RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 NRASP01111 189 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 HRASP01112 189 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 KRASP01116 189 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 IFNA10P01566 189 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 PRM2P04554 102 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 PTHLHP12272 177 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 NFYBP25208 207 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 CASP1P29466 404 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TSPEAR-AS2P59090 65 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 EMX2Q04743 252 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 MRPL51Q4U2R6 128 aaKnown RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 AADACL3Q5VUY0 350 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 Q5XG85 94 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 AMTNQ6UX39 209 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 PRR15Q8IV56 129 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 ZFAND2AQ8N6M9 145 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 OR4C6Q8NH72 309 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 DCANP1Q8TF63 244 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 ZNF799Q96GE5 643 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 IMMP1LQ96LU5 166 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TP53RKQ96S44 253 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TCEAL7Q9BRU2 100 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 YIPF3Q9GZM5 350 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 OR8D2Q9GZM6 311 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 OTORQ9NRC9 128 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 IL36BQ9NZH7 164 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 FUT9Q9Y231 359 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 ARHGAP21Q5T5U3 1957 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 DENND4CQ5VZ89 1909 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 CNTLNQ9NXG0 1405 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 PLXNB1O43157 2135 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 MYH7BA7E2Y1 1941 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 C9orf170A2RU37 121 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 A6NED7 52 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TLCD2A6NGC4 264 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 LEUTXA8MZ59 168 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 BUB1B-PAK6H3BSN5 160 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 J3QQQ9 107 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 IGHV1-46P01743 117 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TRGV3P03979 118 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 RPS10P46783 165 aaKnown RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 CSN1S1P47710 185 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 EIF3IQ13347 325 aaKnown RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 OR8G1Q15617 311 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 RPL22L1Q6P5R6 122 aaKnown RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 SPATA12Q7Z6I5 190 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 RPP25LQ8N5L8 163 aaKnown RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 OR52R1Q8NGF1 315 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 FNDC9Q8TBE3 224 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 RPS4Y2Q8TD47 263 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 RBPMSQ93062 196 aaKnown RBP2.69□□□□□ -1.98
SKP1-209ENST00000522552 LXNQ9BS40 222 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 DERL1Q9BUN8 251 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 TUBA4BQ9H853 241 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 ZNF355PQ9NSJ1 428 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 CKLFQ9UBR5 152 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 ZNF835Q9Y2P0 537 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 LINC00588Q9Y4M8 146 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 ZNF407Q9C0G0 2248 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 AGRNO00468 2067 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 ARHGAP23Q9P227 1491 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 SMG6Q86US8 1419 aaKnown RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 IBTKQ9P2D0 1353 aaPredicted RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 ZNF860A6NHJ4 632 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 FABP5P3A8MUU1 101 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 C1orf196B1AJZ1 125 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 K7ERU9 68 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 M0R378 163 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 BCL2L11O43521 198 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 IGKV1D-33P01593 117 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 IGKV1-33P01594 117 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 NTF3P20783 257 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 NPPCP23582 126 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 AKR1C2P52895 323 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 SELENOWP63302 87 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 C1orf140Q5VVS0 124 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 HAGHLQ6PII5 290 aaPredicted RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 MIR7-3HGQ8N6C7 128 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 Q8N9P0 234 aaPredicted RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 STAG3L4Q8TBR4 150 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 ARL11Q969Q4 196 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 LINC00470Q9BZP3 86 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 LINC00574Q9H8X3 128 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 MAST2Q6P0Q8 1798 aa2.68□□□□□ -1.98
SKP1-209ENST00000522552 ZNF638Q14966 1978 aaKnown RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 AHDC1Q5TGY3 1603 aaPredicted RBP2.68□□□□□ -1.98
SKP1-209ENST00000522552 UBR2Q8IWV8 1755 aa2.67□□□□□ -1.98
SKP1-209ENST00000522552 EML6Q6ZMW3 1958 aa2.67□□□□□ -1.98
SKP1-209ENST00000522552 KDM5BQ9UGL1 1544 aa2.67□□□□□ -1.98
SKP1-209ENST00000522552 DPM2O94777 84 aa2.67□□□□□ -1.98
SKP1-209ENST00000522552 UCHL1P09936 223 aa2.67□□□□□ -1.98
SKP1-209ENST00000522552 NCS1P62166 190 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms