RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TEX45Q8NA69 505 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 OR2T10Q8NGZ9 312 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 NANPQ8TBE9 248 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 TMED6Q8WW62 240 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 SAT2Q96F10 170 aaPredicted RBP6.81□□□□□ -1.32
VAPB-206ENST00000520497 TMEM147Q9BVK8 224 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 GGACTQ9BVM4 153 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 HINT2Q9BX68 163 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 PARD6GQ9BYG4 376 aaPredicted RBP6.81□□□□□ -1.32
VAPB-206ENST00000520497 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 KCNIP2Q9NS61 270 aa6.81□□□□□ -1.32
VAPB-206ENST00000520497 ZNF705EA8MWA4 302 aaPredicted RBP6.8□□□□□ -1.32
VAPB-206ENST00000520497 C17orf112F2Z3M2 114 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 TRIM77I1YAP6 450 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 RRHO14718 337 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 NBR2O15453 112 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 FBXO24O75426 580 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 TMEM50AO95807 157 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 PRH1P02810 166 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 IFNA4P05014 189 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 CD24P25063 80 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 NPY1RP25929 384 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 SNCAP37840 140 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 MMDQ15546 238 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 FAM120AOSQ5T036 256 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 CLEC9AQ6UXN8 241 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 DPPA3Q6W0C5 159 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 HSD17B13Q7Z5P4 300 aaPredicted RBP6.8□□□□□ -1.32
VAPB-206ENST00000520497 COMMD7Q86VX2 200 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 ZNF709Q8N972 641 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 HSD17B11Q8NBQ5 300 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 SLC24A4Q8NFF2 622 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 PIFOQ8TCI5 191 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 ARV1Q9H2C2 271 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 ZNF430Q9H8G1 570 aaPredicted RBP6.8□□□□□ -1.32
VAPB-206ENST00000520497 UQCC1Q9NVA1 299 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 MED9Q9NWA0 146 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 SIGLEC9Q9Y336 463 aa6.8□□□□□ -1.32
VAPB-206ENST00000520497 SOX21Q9Y651 276 aaPredicted RBP6.8□□□□□ -1.32
VAPB-206ENST00000520497 NIPBLQ6KC79 2804 aaeCLIP6.79□□□□□ -1.32
VAPB-206ENST00000520497 RPS10-NUDT3A0A1W2PQS6 291 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 MPDU1O75352 247 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 NMBP08949 121 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 FAM106CPP0CH98 169 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 SPP1P10451 314 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 FOSL1P15407 271 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 TMEM11P17152 192 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 CAMLGP49069 296 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 COMPP49747 757 aaPredicted RBP6.79□□□□□ -1.32
VAPB-206ENST00000520497 SULT1A2P50226 295 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
VAPB-206ENST00000520497 PJVKQ0ZLH3 352 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 RAB31Q13636 194 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 HES1Q14469 280 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 PRSS8Q16651 343 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 C5orf64Q2M2E5 130 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 LRRC75BQ2VPJ9 315 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 SPINK9Q5DT21 86 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 AKR1C8PQ5T2L2 129 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 ETV3LQ6ZN32 361 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 PPP1R27Q86WC6 154 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 BCL6BQ8N143 479 aaPredicted RBP6.79□□□□□ -1.32
VAPB-206ENST00000520497 TEX29Q8N6K0 151 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 OR4C12Q96R67 309 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 MDFIQ99750 246 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 PSMG3Q9BT73 122 aaPredicted RBP6.79□□□□□ -1.32
VAPB-206ENST00000520497 FBXL15Q9H469 300 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 PRDM13Q9H4Q3 707 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 C1RLQ9NZP8 487 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 METTL1Q9UBP6 276 aaKnown RBP6.79□□□□□ -1.32
VAPB-206ENST00000520497 FAM96BQ9Y3D0 163 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 FBXO7Q9Y3I1 522 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 TIMM9Q9Y5J7 89 aa6.79□□□□□ -1.32
VAPB-206ENST00000520497 FN1P02751 2386 aaKnown RBP6.78□□□□□ -1.32
VAPB-206ENST00000520497 TEX50A0A1B0GTY4 177 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 UBE2L5PA0A1B0GUS4 154 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 A0A1B0GW64 132 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 CGB1A6NKQ9 187 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 E7EUB6 86 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 INS-IGF2F8WCM5 200 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 CYB5BO43169 146 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 FGF16O43320 207 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 MBP02144 154 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 MYOD1P15172 320 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 VDAC2P45880 294 aaPredicted RBP6.78□□□□□ -1.32
VAPB-206ENST00000520497 RPL27AP46776 148 aaKnown RBP6.78□□□□□ -1.32
VAPB-206ENST00000520497 DLK1P80370 383 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 SERF2P84101 59 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 HNF4GQ14541 408 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 DEFB112Q30KQ8 113 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 FAM74A1Q5RGS3 127 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 SLC7A5P1Q8MH63 180 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 Q8N9W7 124 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 OR2G3Q8NGZ4 309 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 SSX3Q99909 188 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 SRSF8Q9BRL6 282 aaKnown RBP6.78□□□□□ -1.32
VAPB-206ENST00000520497 WFDC1Q9HC57 220 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 PARP11Q9NR21 331 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 NDUFA4L2Q9NRX3 87 aa6.78□□□□□ -1.32
VAPB-206ENST00000520497 TMEM160Q9NX00 188 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms