RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 MALSU1Q96EH3 234 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 RCC1LQ96I51 464 aaKnown RBP4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 EAF1Q96JC9 268 aaPredicted RBP4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 MGST2Q99735 147 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SRSF8Q9BRL6 282 aaKnown RBP4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HINT2Q9BX68 163 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 SMDT1Q9H4I9 107 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 VSIRQ9H7M9 311 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 NPVFQ9HCQ7 196 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 TBL2Q9Y4P3 447 aaKnown RBP4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 HILPDAQ9Y5L2 63 aa4.34□□□□□ -1.71
SCARNA20.4-201ENST00000516969 CREBBPQ92793 2442 aa4.34□□□□□ -1.72
SCARNA20.4-201ENST00000516969 APCP25054 2843 aa4.34□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CELSR1Q9NYQ6 3014 aa4.34□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SVEP1Q4LDE5 3571 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A096LNT2 108 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CENPVL3A0A0U1RRI6 287 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A1L4Q6 167 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SEC14L6B5MCN3 397 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C17orf112F2Z3M2 114 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FCN1O00602 326 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 AGPAT2O15120 278 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NBR2O15453 112 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 YIF1AO95070 293 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HBE1P02100 147 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR13C7P0DN81 318 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ADCYAP1P18509 176 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OPRK1P41145 380 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RPL27AP46776 148 aaKnown RBP4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RPL29P47914 159 aaKnown RBP4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SUB1P53999 127 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LGALS4P56470 323 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RAB2AP61019 212 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 AKR1C1Q04828 323 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CD69Q07108 199 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GAMTQ14353 236 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PEA15Q15121 130 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SSX2Q16385 188 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MLANAQ16655 118 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GUK1Q16774 197 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TMEM249Q2WGJ8 235 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FBLN7Q53RD9 439 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FFAR4Q5NUL3 377 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C10orf55Q5SWW7 151 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TEPPQ6URK8 271 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SSX7Q7RTT5 188 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CCDC28AQ8IWP9 274 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR2T10Q8NGZ9 312 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RNASEH2CQ8TDP1 164 aaKnown RBP4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 P2RX4Q99571 388 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GGTLC1Q9BX51 225 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SEC11CQ9BY50 192 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FBXL15Q9H469 300 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LPAR2Q9HBW0 351 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TREM1Q9NP99 234 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KIAA1456Q9P272 454 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 METTL1Q9UBP6 276 aaKnown RBP4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CARHSP1Q9Y2V2 147 aaKnown RBP4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FAM96BQ9Y3D0 163 aa4.33□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZANQ9Y493 2812 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGKV1OR2-108A0A075B7D4 117 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CTXND1A0A1B0GTU2 59 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A1W2PRD5 423 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A1W2PRF3 423 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A1W2PRM7 423 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SMCO3A2RU48 225 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RBFOX3A6NFN3 312 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NPFFO15130 113 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ACTL6BO94805 426 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CRYGCP07315 174 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SNRNP70P08621 437 aaKnown RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LINC00869P0C866 280 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PLA2G2AP14555 144 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 AREGP15514 252 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC25A16P16260 332 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 M6PRP20645 277 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PAX6P26367 422 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SAA4P35542 130 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MFAP2P55001 183 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ELLP55199 621 aaPredicted RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KRTAP10-9P60411 292 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PRR20EP86478 221 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PRR20CP86479 221 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PRR20DP86480 221 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PRR20BP86481 221 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PRR20AP86496 221 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RAB31Q13636 194 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TNXAQ16473 311 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C5orf64Q2M2E5 130 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ACOT6Q3I5F7 207 aaPredicted RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZNF506Q5JVG8 444 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZNF787Q6DD87 383 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MRPL41Q8IXM3 137 aaKnown RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PIP4P2Q8N4L2 257 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR10G4Q8NGN3 311 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR10G9Q8NGN4 311 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR10G7Q8NGN6 311 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms