RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 RAB9AP51151 201 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CRIP2P52943 208 aaPredicted RBP4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 RHOGP84095 191 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NDPQ00604 133 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C2orf68Q2NKX9 166 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NMSQ5H8A3 153 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ETFRF1Q6IPR1 90 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NDUFA11Q86Y39 141 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NECAP1Q8NC96 275 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 KLHL30-AS1Q8NEE0 82 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR4F17Q8NGA8 305 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR10W1Q8NGF6 305 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 WFDC12Q8WWY7 111 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 EEF1AKMT3Q96AZ1 226 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PINX1Q96BK5 328 aaKnown RBP4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CXorf58Q96LI9 332 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR4F4Q96R69 305 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MAGT1Q9H0U3 335 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NDUFA4L2Q9NRX3 87 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HSPB7Q9UBY9 170 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 STRAPQ9Y3F4 350 aaKnown RBP4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 LSM5Q9Y4Y9 91 aaKnown RBP4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 U3KQ87 197 aa4.28□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C7orf66A4D0T2 115 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 TEX22C9J3V5 150 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SSSCA1O60232 199 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR2J3O76001 311 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IGLV1-40P01703 118 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IGHV3-11P01762 117 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PRH1P02810 166 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RPLP1P05386 114 aaKnown RBP4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 P0C879 139 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IAPPP10997 89 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 EGR2P11161 476 aaPredicted RBP4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CTRB1P17538 263 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PPIFP30405 207 aaKnown RBP4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OPRK1P41145 380 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 NPBWR1P48145 328 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 WT1-ASQ06250 92 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 FGL1Q08830 312 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OXA1LQ15070 435 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 KRTAP21-3Q3LHN1 58 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 Q56UQ5 140 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SPANXN5Q5MJ07 72 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CTRB2Q6GPI1 263 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ACSM6Q6P461 480 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 Q6ZRM9 215 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR2C3Q8N628 320 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 UBAC2Q8NBM4 344 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SLC24A4Q8NFF2 622 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR1P1Q8NH06 330 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 THAP6Q8TBB0 222 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DCUN1D4Q92564 292 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SLC35E1Q96K37 410 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 UBE2E2Q96LR5 201 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR5B12Q96R08 314 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RAB40CQ96S21 281 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CITED2Q99967 270 aaPredicted RBP4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 GNB4Q9HAV0 340 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RANGRFQ9HD47 186 aaPredicted RBP4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PSENENQ9NZ42 101 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 FBXO7Q9Y3I1 522 aa4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 F11RQ9Y624 299 aaKnown RBP4.27□□□□□ -1.73
SCARNA16.4-201ENST00000516956 TRBV7-1A0A0A6YYK4 115 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 IGLC7A0M8Q6 106 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ANKRD34BA5PLL1 514 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 DBX1A6NMT0 343 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 GNG7O60262 68 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SIX6O95475 246 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 FABP1P07148 127 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CRYGCP07315 174 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 LGALS1P09382 135 aaKnown RBP4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SLC25A4P12235 298 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZP3P21754 424 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 PSMB8P28062 276 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CDX1P47902 265 aaPredicted RBP4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CAV2P51636 162 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MFAP4P55083 255 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RRAS2P62070 204 aaPredicted RBP4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 POLR2GP62487 172 aaKnown RBP eCLIP4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 CD83Q01151 205 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 EXOSC2Q13868 293 aaKnown RBP4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MRGPRG-AS1Q2M3A8 158 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 C15orf32Q32M92 178 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 LRRC37A5PQ49AS3 106 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ETV3LQ6ZN32 361 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 LCNL1Q6ZST4 164 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 STX12Q86Y82 276 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ZNF491Q8N8L2 437 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR4D5Q8NGN0 318 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR1N2Q8NGR9 330 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 SPATA3Q8NHX4 192 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 RNASEH2CQ8TDP1 164 aaKnown RBP4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 VN1R17PQ8TDU5 208 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 ASB13Q8WXK3 278 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 OR10C1Q96KK4 312 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 P2RX4Q99571 388 aa4.26□□□□□ -1.73
SCARNA16.4-201ENST00000516956 MDFIQ99750 246 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms