RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LILRB2Q8N423 598 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 OR10C1Q96KK4 312 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 ATP6V0BQ99437 205 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 SCN3BQ9NY72 215 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 DNASE2O00115 360 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 P0DMU3 169 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 FAM231AP0DMU4 169 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 FAM231CP0DMU5 169 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 RELQ04864 619 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 MLLT11Q13015 90 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 STHQ8IWL8 128 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 OR13F1Q8NGS4 319 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 MS4A6AQ9H2W1 248 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 ACOT13Q9NPJ3 140 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 NDUFA4L2Q9NRX3 87 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 CELA1Q9UNI1 258 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 NSG2Q9Y328 171 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 X6R8D5 127 aa14.68□□□□□ -0.06
SQSTM1-215ENST00000514093 IGLV2-18A0A075B6J9 118 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 DEFB131BA0A096LNP1 70 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 IGHV3-66A0A0C4DH42 116 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 SMIM30A4D0T7 59 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 APOHP02749 345 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 MIFP14174 115 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 GNG2P59768 71 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 THOC7Q6I9Y2 204 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 OR1L8Q8NGR8 309 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 OR51H1Q8NH63 302 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 ST8SIA2Q92186 375 aa14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 DGCR14Q96DF8 476 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-215ENST00000514093 DFFBO76075 338 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 IGHV3-48P01763 117 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 RPL11P62913 178 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 CATR1Q13166 79 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 C12orf74Q32Q52 190 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 LGALS9BQ3B8N2 356 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 HSD17B13Q7Z5P4 300 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 LSM10Q969L4 123 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 MGLLQ99685 303 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 SLC5A7Q9GZV3 580 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 CLEC5AQ9NY25 188 aa14.66□□□□□ -0.06
SQSTM1-215ENST00000514093 TRAV1-2A0A0B4J238 106 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 ST8SIA3O43173 380 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 AMBPP02760 352 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 RAB3BP20337 219 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 C4BPBP20851 252 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 FXYD4P59646 89 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 ARPC4P59998 168 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 ZBTB34Q8NCN2 500 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 SLC25A46Q96AG3 418 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 CCDC90BQ9GZT6 254 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 PLEKHA2Q9HB19 425 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 OR51B2Q9Y5P1 312 aa14.65□□□□□ -0.06
SQSTM1-215ENST00000514093 AGRNO00468 2067 aa14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 ZNF705EA8MWA4 302 aaPredicted RBP14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 PPYP01298 95 aa14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 FCER2P06734 321 aa14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 MSMO1Q15800 293 aa14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 ZNF818PQ6ZRF7 136 aa14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 NDUFAF3Q9BU61 184 aa14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 NXF2Q9GZY0 626 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-215ENST00000514093 EIF4EP06730 217 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 FGF2P09038 288 aa14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 MYL9P24844 172 aa14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 MFAP4P55083 255 aa14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 AADACL3Q5VUY0 350 aa14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 TRPT1Q86TN4 253 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 MISP3Q96FF7 219 aa14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 RABAC1Q9UI14 185 aa14.63□□□□□ -0.07
SQSTM1-215ENST00000514093 KNCNA6PVL3 124 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 I3L2K1 104 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 RGS10O43665 173 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 ERVK-16P61578 105 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 RCN1Q15293 331 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 TOMM20LQ6UXN7 152 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 BEST4Q8NFU0 473 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 DUSP21Q9H596 190 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 VSIRQ9H7M9 311 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 TBC1D24Q9ULP9 559 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 TPRKBQ9Y3C4 175 aa14.62□□□□□ -0.07
SQSTM1-215ENST00000514093 MARCH11A6NNE9 402 aa14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 CASQ2O14958 399 aaPredicted RBP14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 KRASP01116 189 aa14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 IFNA10P01566 189 aa14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 OGFRL1Q5TC84 451 aaPredicted RBP14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 TMEM17Q86X19 198 aa14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 DUSP18Q8NEJ0 188 aa14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 COMMD9Q9P000 198 aa14.61□□□□□ -0.07
SQSTM1-215ENST00000514093 DBX1A6NMT0 343 aa14.6□□□□□ -0.07
SQSTM1-215ENST00000514093 MT-CO2P00403 227 aa14.6□□□□□ -0.07
SQSTM1-215ENST00000514093 UBE2UQ5VVX9 321 aa14.6□□□□□ -0.07
SQSTM1-215ENST00000514093 Q6ZR54 194 aa14.6□□□□□ -0.07
SQSTM1-215ENST00000514093 OR1P1Q8NH06 330 aa14.6□□□□□ -0.07
SQSTM1-215ENST00000514093 GINS3Q9BRX5 216 aa14.6□□□□□ -0.07
SQSTM1-215ENST00000514093 GNG7O60262 68 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 SNAPC5O75971 98 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 CD5P06127 495 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 SPP1P10451 314 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 G6PCP35575 357 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 LPAR6P43657 344 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms