RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 HSD17B13Q7Z5P4 300 aaPredicted RBP8.14□□□□□ -1.11
RNF4-212ENST00000509258 OR1L6Q8NGR2 347 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 OR1L8Q8NGR8 309 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 OR52I2Q8NH67 350 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 SCARB1Q8WTV0 552 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 MRGPRFQ96AM1 343 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 ABHD1Q96SE0 405 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 TMEM14BQ9NUH8 114 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 MRPL27Q9P0M9 148 aaKnown RBP8.14□□□□□ -1.11
RNF4-212ENST00000509258 KLK11Q9UBX7 282 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 F11RQ9Y624 299 aaKnown RBP8.14□□□□□ -1.11
RNF4-212ENST00000509258 C15orf61A6NNL5 157 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 ZNF207O43670 478 aaKnown RBP8.13□□□□□ -1.11
RNF4-212ENST00000509258 IGKV1-5P01602 117 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 IGHV3-48P01763 117 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 FGF2P09038 288 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 RCVRNP35243 200 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 APOC4P55056 127 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 ERVK-16P61578 105 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 SPINK9Q5DT21 86 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 GPR107Q5VW38 600 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 LAMTOR1Q6IAA8 161 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 LHFPL1Q86WI0 220 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 TMEM190Q8WZ59 177 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 CMTM3Q96MX0 182 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 SCPEP1Q9HB40 452 aa8.13□□□□□ -1.11
RNF4-212ENST00000509258 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 CD3DP04234 171 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 P0C879 139 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 ALDH3B2P48448 385 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 RORCP51449 518 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 UCP3P55916 312 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 TSPAN5P62079 268 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 SPCS2Q15005 226 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 CMTM1Q8IZ96 169 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 CADM3Q8N126 398 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 VN1R17PQ8TDU5 208 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 LINC00476Q8WZB0 136 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 LSM10Q969L4 123 aaKnown RBP8.12□□□□□ -1.11
RNF4-212ENST00000509258 TP53RKQ96S44 253 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 SPAG8Q99932 426 aaPredicted RBP8.12□□□□□ -1.11
RNF4-212ENST00000509258 EXTL2Q9UBQ6 330 aa8.12□□□□□ -1.11
RNF4-212ENST00000509258 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 FAM25CB3EWG5 89 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 FAM25GB3EWG6 89 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 I3L2K1 104 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 UBE2CO00762 179 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 SNAPC5O75971 98 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 BMI1P35226 326 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 PPP5CP53041 499 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 FAAP20Q6NZ36 180 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 TMEM217Q8N7C4 229 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 C6orf62Q9GZU0 229 aaPredicted RBP8.11□□□□□ -1.11
RNF4-212ENST00000509258 C5orf66Q9H5L9 145 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 C21orf62Q9NYP8 219 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 MTFP1Q9UDX5 166 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 UBQLN2Q9UHD9 624 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 TP53TG1Q9Y2A0 90 aa8.11□□□□□ -1.11
RNF4-212ENST00000509258 IGHV3-49A0A0A0MS15 119 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 A0A0B4J293 547 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 SMIM31A0A1B0GVY4 71 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 CXorf65A6NEN9 183 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 CTDSP2O14595 271 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 CTSGP08311 255 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 ZNF182P17025 639 aaPredicted RBP8.1□□□□□ -1.11
RNF4-212ENST00000509258 S100GP29377 79 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 PRCDQ00LT1 54 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.116e-6■□□□□ 9.2
RNF4-212ENST00000509258 SP6Q3SY56 376 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 SPSB3Q6PJ21 355 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 Q6ZWC4 215 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 BSCL2Q96G97 398 aaPredicted RBP8.1□□□□□ -1.11
RNF4-212ENST00000509258 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
RNF4-212ENST00000509258 MRPL36Q9P0J6 103 aaKnown RBP8.1□□□□□ -1.11
RNF4-212ENST00000509258 PRNDQ9UKY0 176 aa8.1□□□□□ -1.11
RNF4-212ENST00000509258 KIR2DL5BA0A0G2JN68 375 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 KIR2DL5BA0A0G2JPC4 375 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 OR4C46A6NHA9 309 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 TSPAN4O14817 238 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 LY6G6CO95867 125 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 CD74P04233 296 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 PGAM2P15259 253 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 CMC4P56277 68 aaPredicted RBP8.09□□□□□ -1.11
RNF4-212ENST00000509258 PIGPP57054 158 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 RND3P61587 244 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 ZNF124Q15973 351 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 ODF3L2Q3SX64 289 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 WFDC3Q8IUB2 231 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 KIR2DL5AQ8N109 375 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 STPG3Q8N7X2 389 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 OR13C8Q8NGS7 320 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 OR1P1Q8NH06 330 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 OR5B3Q8NH48 314 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 KIR2DL5BQ8NHK3 375 aa8.09□□□□□ -1.11
RNF4-212ENST00000509258 LHFPL5Q8TAF8 219 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms