RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 SSX1Q16384 188 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 CDNFQ49AH0 187 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 PVRIGQ6DKI7 326 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 CNIH2Q6PI25 160 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 TMEM116Q8NCL8 245 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 SCARB1Q8WTV0 552 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 SECTM1Q8WVN6 248 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 CMTM3Q96MX0 182 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 QTRT1Q9BXR0 403 aaKnown RBP6.67□□□□□ -1.34
PTPN20-216ENST00000506080 ATG5Q9H1Y0 275 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 HRH4Q9H3N8 390 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 CCL28Q9NRJ3 127 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 C21orf62Q9NYP8 219 aa6.67□□□□□ -1.34
PTPN20-216ENST00000506080 HSPG2P98160 4391 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 METTL21EPA6NDL7 271 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 C15orf61A6NNL5 157 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 SULT1C2O00338 296 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 TRAPPC2P0DI81 140 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 TRAPPC2BP0DI82 140 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 DEFB131AP59861 70 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 WT1-ASQ06250 92 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 TRAM1Q15629 374 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 PACRGLQ8N7B6 248 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 POM121L12Q8N7R1 296 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 DMBX1Q8NFW5 382 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 NUDCD2Q8WVJ2 157 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 GIMAP1Q8WWP7 306 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 ZNF414Q96IQ9 312 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 SRSF8Q9BRL6 282 aaKnown RBP6.66□□□□□ -1.34
PTPN20-216ENST00000506080 AIFM2Q9BRQ8 373 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 HINT2Q9BX68 163 aa6.66□□□□□ -1.34
PTPN20-216ENST00000506080 TEX50A0A1B0GTY4 177 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 ERICH4A6NGS2 130 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 K7EIM0 57 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 NUPL2O15504 423 aaKnown RBP6.65□□□□□ -1.35
PTPN20-216ENST00000506080 CTSGP08311 255 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 PTHLHP12272 177 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 NQO2P16083 231 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 TAS2R31P59538 309 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 PAFAH1B2P68402 229 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 FAM90A2PQ658T7 463 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 ZNF773Q6PK81 442 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 ZNF767PQ75MW2 155 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 TCF24Q7RTU0 167 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 STHQ8IWL8 128 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 CENPSQ8N2Z9 138 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 RNF126Q9BV68 326 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 TMEM140Q9NV12 185 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 CELA1Q9UNI1 258 aa6.65□□□□□ -1.35
PTPN20-216ENST00000506080 F11RQ9Y624 299 aaKnown RBP6.65□□□□□ -1.35
PTPN20-216ENST00000506080 IGLV2-18A0A075B6J9 118 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 TRAV14DV4A0A0A6YYC5 116 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 TMEM235A6NFC5 223 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 IFITM5A6NNB3 132 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 DNASE2O00115 360 aaPredicted RBP6.64□□□□□ -1.35
PTPN20-216ENST00000506080 PDCD5O14737 125 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 HPRT1P00492 218 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 P0DMU3 169 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 FAM231AP0DMU4 169 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 FAM231CP0DMU5 169 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 MIFP14174 115 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 PSMA1P25786 263 aaKnown RBP6.64□□□□□ -1.35
PTPN20-216ENST00000506080 SRSF3P84103 164 aaKnown RBP6.64□□□□□ -1.35
PTPN20-216ENST00000506080 RELQ04864 619 aaPredicted RBP6.64□□□□□ -1.35
PTPN20-216ENST00000506080 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 ARL6IP1Q15041 203 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 POU2AF1Q16633 256 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 HACD4Q5VWC8 232 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 FAM24BQ8N5W8 94 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 OR1L8Q8NGR8 309 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 OR51H1Q8NH63 302 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 SCRT1Q9BWW7 348 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 SLC5A7Q9GZV3 580 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 DCSTAMPQ9H295 470 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 C8orf4Q9NR00 106 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 SCN3BQ9NY72 215 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 ANXA10Q9UJ72 324 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 NSG2Q9Y328 171 aa6.64□□□□□ -1.35
PTPN20-216ENST00000506080 DEFB131BA0A096LNP1 70 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 IGHV3-66A0A0C4DH42 116 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 SMIM30A4D0T7 59 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 RBFOX2O43251 390 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPN20-216ENST00000506080 SSX5O60225 188 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 AMBPP02760 352 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 EIF4EP06730 217 aaKnown RBP6.63□□□□□ -1.35
PTPN20-216ENST00000506080 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-216ENST00000506080 FCGR2CP31995 323 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 FXYD4P59646 89 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 GNG2P59768 71 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 ARPC4P59998 168 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 MLLT11Q13015 90 aaPredicted RBP6.63□□□□□ -1.35
PTPN20-216ENST00000506080 CATR1Q13166 79 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 LGALS9BQ3B8N2 356 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 THOC7Q6I9Y2 204 aaKnown RBP6.63□□□□□ -1.35
PTPN20-216ENST00000506080 LILRB2Q8N423 598 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 OR13F1Q8NGS4 319 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 ST8SIA2Q92186 375 aa6.63□□□□□ -1.35
PTPN20-216ENST00000506080 LSM10Q969L4 123 aaKnown RBP6.63□□□□□ -1.35
PTPN20-216ENST00000506080 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms