RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 A0A1B0GVI7 797 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 C20orf202A1L168 122 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 TMEM218A2RU14 115 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF670-ZNF695F2Z2N8 137 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 SMLR1H3BR10 107 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 M0R135 149 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 TGOLN2O43493 480 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 XRCC2O43543 280 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 TTRP02766 147 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 CD2P06729 351 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 UBCP0CG48 685 aaKnown RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 FGF7P21781 194 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 RPS27P42677 84 aaKnown RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 GUCA1AP43080 201 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 TAS2R43P59537 309 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 RPS11P62280 158 aaKnown RBP eCLIP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 PITPNAQ00169 270 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 EMX1Q04741 257 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 MLLT11Q13015 90 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 CDK5R1Q15078 307 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 PEA15Q15121 130 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 RSU1Q15404 277 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 TBC1D28Q2M2D7 210 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 ACOT7LQ6ZUV0 252 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 AHSA2Q719I0 299 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 LRRC28Q86X40 367 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 LYPD6Q86Y78 171 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 MS4A15Q8N5U1 240 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 PXT1Q8NFP0 134 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 OR10W1Q8NGF6 305 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 OR2G2Q8NGZ5 317 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 RXFP4Q8TDU9 374 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 SPTSSAQ969W0 71 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 SMIM19Q96E16 107 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 MRPS24Q96EL2 167 aaKnown RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 CPNE2Q96FN4 548 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF799Q96GE5 643 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 SUCNR1Q9BXA5 334 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 CHST5Q9GZS9 411 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 ACOT13Q9NPJ3 140 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 RASL12Q9NYN1 266 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 PITPNC1Q9UKF7 332 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 ZFP30Q9Y2G7 519 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 R4GMQ9 66 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 V9GYS6 101 aa3.84□□□□□ -1.79
NIPBL-205ENST00000505998 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.8
NIPBL-205ENST00000505998 DYSFO75923 2080 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 LRBAP50851 2863 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 C5orf63A6NC05 138 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 TMEM212A6NML5 194 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 IQCF6A8MYZ5 107 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 DISC1C4P0D8 188 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 K7ERU9 68 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 M0R233 179 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 CYB5BO43169 146 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 CA11O75493 328 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 DHRS3O75911 302 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 FSTL3O95633 263 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RCC1P18754 421 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 APLNRP35414 380 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 OR12D2P58182 307 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 ZNF121P58317 390 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RPS23P62266 143 aaKnown RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 GNB2P62879 340 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 MRPS10P82664 201 aaKnown RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RAB31Q13636 194 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 TAF9Q16594 264 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 TMEM249Q2WGJ8 235 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 SCGB2B2Q4G0G5 96 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RPL22L1Q6P5R6 122 aaKnown RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 UNQ9370/PRO34162Q6UXP9 181 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 TMEM144Q7Z5S9 345 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 OR8B12Q8NGG6 310 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 OR13C9Q8NGT0 318 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 COQ8AQ8NI60 647 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 LINC01560Q8TB33 94 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 GPX8Q8TED1 209 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RGP1Q92546 391 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 LINC00167Q96N53 147 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 HIST1H4GQ99525 98 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 TSNAXQ99598 290 aaKnown RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 SNHG12Q9BXW3 62 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 FN3KRPQ9HA64 309 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RAB18Q9NP72 206 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 CA10Q9NS85 328 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 NDUFB11Q9NX14 153 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 POLR1DQ9Y2S0 133 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 RBM7Q9Y580 266 aaKnown RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 ZNF469Q96JG9 3925 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-205ENST00000505998 DOCK11Q5JSL3 2073 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 CCDC168Q8NDH2 2452 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 MYO9AB2RTY4 2548 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 ITPR3Q14573 2671 aa3.83□□□□□ -1.8
NIPBL-205ENST00000505998 SETXQ7Z333 2677 aaKnown RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CR1P17927 2039 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TMEM269A0A1B0GVZ9 245 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 WI2-2373I1.2A0A1W2PRP0 233 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 DAPL1A0PJW8 107 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 C5orf49A4QMS7 147 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms