RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 PLAC8L1A1L4L8 177 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PRORSD1PA6NEY8 169 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 M0R1X1 148 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SOCS3O14543 225 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GYG2O15488 501 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ORC5O43913 435 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 KCNK2O95069 426 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CYB5R3P00387 301 aaPredicted RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PDYNP01213 254 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HLA-DPB1P04440 258 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IL1RNP18510 177 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GADD45AP24522 165 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 S100A3P33764 101 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SSR2P43308 183 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 POLR2JP52435 117 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CDC42P60953 191 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GRB2P62993 217 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HLA-DRB3P79483 266 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DCDP81605 110 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FABP5Q01469 135 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 KIAA0040Q15053 153 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IAH1Q2TAA2 248 aaPredicted RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FAM201AQ5SY85 155 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 AKR1C8PQ5T2L2 129 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 LPCAT3Q6P1A2 487 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 IGFL2Q6UWQ7 119 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RPS27LQ71UM5 84 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 COMMD6Q7Z4G1 85 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 CLVS1Q8IUQ0 354 aaPredicted RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RNF175Q8N4F7 328 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 EIF4E3Q8N5X7 224 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR4M1Q8NGD0 313 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR8S1Q8NH09 359 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 KCNS1Q96KK3 526 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR7D2Q96RA2 312 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TBX5Q99593 518 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 HSD17B10Q99714 261 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PYGO2Q9BRQ0 406 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 GNB1LQ9BYB4 327 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ALX4Q9H161 411 aaPredicted RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ABCG5Q9H222 651 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF702PQ9H963 129 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 MRPL27Q9P0M9 148 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RSL24D1Q9UHA3 163 aaKnown RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 POMPQ9Y244 141 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PKIGQ9Y2B9 76 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FIS1Q9Y3D6 152 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SMAD5-AS1Q9Y6J3 95 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 USP9YO00507 2555 aaPredicted RBP3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 BSNQ9UPA5 3926 aa3.09□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NAV3Q8IVL0 2385 aa3.09□□□□□ -1.92
PDLIM1P4-201ENST00000504327 TNRC6AQ8NDV7 1962 aaKnown RBP3.09□□□□□ -1.92
PDLIM1P4-201ENST00000504327 PCNX3Q9H6A9 2034 aa3.09□□□□□ -1.92
PDLIM1P4-201ENST00000504327 UTP20O75691 2785 aaKnown RBP3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 COL12A1Q99715 3063 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 NUP210LQ5VU65 1888 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 IGSF23A1L1A6 192 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 ZNF860A6NHJ4 632 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 ZNF705GA8MUZ8 300 aaPredicted RBP3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 K7EM74 188 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 DNASE2O00115 360 aaPredicted RBP3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 SLC17A3O00476 420 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 CHST10O43529 356 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 COX7A2P2O60397 106 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 GCM2O75603 506 aaPredicted RBP3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 SERF1AO75920 110 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 GPR75O95800 540 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 SCGB1C2P0DMR2 95 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 COX4I1P13073 169 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 POLR2IP36954 125 aaKnown RBP3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 MAP2K4P45985 399 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 FOXA1P55317 472 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 KRTAP10-3P60369 221 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 RPL38P63173 70 aaKnown RBP3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 DEFB109BQ30KR1 87 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 DEFB134Q4QY38 66 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 TMEM128Q5BJH2 165 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 FAM222AQ5U5X8 452 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 NXNL2Q5VZ03 156 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 LCN8Q6JVE9 175 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 NANOGP8Q6NSW7 305 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 CGB2Q6NT52 195 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 FAAP20Q6NZ36 180 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 ZNF613Q6PF04 617 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 TOMM20LQ6UXN7 152 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 SHISA6Q6ZSJ9 500 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 TMPPEQ6ZT21 453 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 DEFB125Q8N687 156 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 OR8J3Q8NGG0 315 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 OR52L1Q8NGH7 329 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 SCGB1C1Q8TD33 95 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 GNPDA2Q8TDQ7 276 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 ORAOV1Q8WV07 137 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 MS4A6EQ96DS6 147 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 CCDC115Q96NT0 180 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 OR52B2Q96RD2 323 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 LINC01587Q99440 93 aa3.08□□□□□ -1.92
PDLIM1P4-201ENST00000504327 TIMM17AQ99595 171 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms