RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 CREBL2O60519 120 aaPredicted RBP3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 NPYP01303 97 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 IFNA10P01566 189 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 IFNA7P01567 189 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 LGALS1P09382 135 aaKnown RBP3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 CASP1P29466 404 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 CA5AP35218 305 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 XCL1P47992 114 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 TPI1P60174 286 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 SARNPP82979 210 aaKnown RBP3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 RPL18Q07020 188 aaKnown RBP3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 ALX1Q15699 326 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 LY6EQ16553 131 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 LYRM7Q5U5X0 104 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 C12orf45Q8N5I9 185 aaPredicted RBP3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 OR10D4PQ8NGN7 298 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 OR13C4Q8NGS5 318 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 TMEM70Q9BUB7 260 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 MAP1LC3BQ9GZQ8 125 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 SH3BGRL3Q9H299 93 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 SLC39A9Q9NUM3 307 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 COL18A1P39060 1754 aa3.12□□□□□ -1.91
SOX2-OT-216ENST00000497122 PRRC2AP48634 2157 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 ARID1AO14497 2285 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 TRAV41A0A0B4J266 112 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 SIGLEC16A6NMB1 481 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 FABP5P3A8MUU1 101 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 VGLL3A8MV65 326 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 TRAPPC2LH3BP13 241 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 H3BPC8 53 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 PFDN1O60925 122 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 CPSF4O95639 269 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 BPGMP07738 259 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 S100A4P26447 101 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 EIF2B2P49770 351 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 PIGPP57054 158 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 MIAQ16674 131 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 SMCR5Q8TEV8 140 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 IMMP2LQ96T52 175 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 MED11Q9P086 117 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 PRO0461Q9UI25 63 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 TIMM22Q9Y584 194 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 MYH2Q9UKX2 1941 aa3.11□□□□□ -1.91
SOX2-OT-216ENST00000497122 TRAV4A0A0B4J268 109 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 C11orf86A6NJI1 115 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 J3QRK9 145 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 PSCAO43653 123 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 HRES1P13985 223 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 CBR1P16152 277 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 GZMHP20718 246 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 PSMD8P48556 350 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 BAMBIQ13145 260 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 CLVS1Q8IUQ0 354 aaPredicted RBP3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 C2orf50Q96LR7 162 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 RSPO3Q9BXY4 272 aaPredicted RBP3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 OR8D2Q9GZM6 311 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 AICDAQ9GZX7 198 aa3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 RBM7Q9Y580 266 aaKnown RBP3.1□□□□□ -1.91
SOX2-OT-216ENST00000497122 TRBV19A0A075B6N1 114 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 IFNA14P01570 189 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 GABRA4P48169 554 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 ZNF80P51504 273 aaPredicted RBP3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 HIST1H4AP62805 103 aaKnown RBP3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 EXOC3-AS1Q8N2X6 119 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 OR13D1Q8NGV5 346 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 LYSMD1Q96S90 227 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 GINS4Q9BRT9 223 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 AMMECR1Q9Y4X0 333 aaPredicted RBP3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 HSPE1-MOB4S4R3N1 261 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 MAST2Q6P0Q8 1798 aa3.09□□□□□ -1.91
SOX2-OT-216ENST00000497122 SPATA31E1Q6ZUB1 1445 aa3.09□□□□□ -1.92
SOX2-OT-216ENST00000497122 TRPM6Q9BX84 2022 aa3.09□□□□□ -1.92
SOX2-OT-216ENST00000497122 IGHV3-15A0A0B4J1V0 119 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 A0A0J9YW62 118 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 TMEM235A6NFC5 223 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 RIIAD1A6NNX1 92 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 RTL8CO15255 209 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 OR2J2O76002 312 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 IGHV3-7P01780 117 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 APOA2P02652 100 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 SRIP30626 198 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 G6PCP35575 357 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 KISS1Q15726 138 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 OR52R1Q8NGF1 315 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 MBD3L1Q8WWY6 194 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 MALSU1Q96EH3 234 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 IMUPQ9GZP8 106 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 TIMM9Q9Y5J7 89 aa3.08□□□□□ -1.92
SOX2-OT-216ENST00000497122 KIF1BO60333 1816 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 A0A0J9YX75 114 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 IRGMA1A4Y4 181 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 FUOMA2VDF0 154 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 BUB1B-PAK6H3BSN5 160 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 ZNF73O43830 326 aaPredicted RBP3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 ORC5O43913 435 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 RPS4Y1P22090 263 aaKnown RBP3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 COL8A2P25067 703 aa3.07□□□□□ -1.92
SOX2-OT-216ENST00000497122 RPL28P46779 137 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms