RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CXorf58Q96LI9 332 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 FAM110AQ9BQ89 295 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 CHRDL1Q9BU40 450 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 TMEM14BQ9NUH8 114 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 F11RQ9Y624 299 aaKnown RBP7.98□□□□□ -1.13
NELFE-213ENST00000494956 STAB2Q8WWQ8 2551 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 A0A0G2JRQ6 117 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 RBMY1BA6NDE4 496 aaKnown RBP7.97□□□□□ -1.13
NELFE-213ENST00000494956 RBMY1EA6NEQ0 496 aaKnown RBP7.97□□□□□ -1.13
NELFE-213ENST00000494956 A8MWP6 167 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 K7EIM0 57 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 ZNF207O43670 478 aaKnown RBP7.97□□□□□ -1.13
NELFE-213ENST00000494956 IGKV1-5P01602 117 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 IFNA6P05013 189 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 RBMY1DP0C7P1 496 aaKnown RBP7.97□□□□□ -1.13
NELFE-213ENST00000494956 ADMP35318 185 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 ZNF57Q68EA5 555 aaPredicted RBP7.97□□□□□ -1.13
NELFE-213ENST00000494956 OR13C8Q8NGS7 320 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 OR2K2Q8NGT1 345 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 MUC7Q8TAX7 377 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 MARCH1Q8TCQ1 289 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 SRSF8Q9BRL6 282 aaKnown RBP7.97□□□□□ -1.13
NELFE-213ENST00000494956 SRD5A3Q9H8P0 318 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 PRNDQ9UKY0 176 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 NBEAL2Q6ZNJ1 2754 aa7.97□□□□□ -1.13
NELFE-213ENST00000494956 OR11H12B2RN74 326 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 RAB3DO95716 219 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 CD74P04233 296 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 FGF2P09038 288 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 S100GP29377 79 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 RND3P61587 244 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 ZFAND6Q6FIF0 208 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 THOC7Q6I9Y2 204 aaKnown RBP7.96□□□□□ -1.14
NELFE-213ENST00000494956 LINC00322Q6ZN03 302 aaPredicted RBP7.96□□□□□ -1.14
NELFE-213ENST00000494956 TMEM229BQ8NBD8 167 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 OR5B3Q8NH48 314 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 OR4A16Q8NH70 328 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 DYNC2LI1Q8TCX1 351 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 VN1R17PQ8TDU5 208 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 MISP3Q96FF7 219 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 ZNF436Q9C0F3 470 aaPredicted RBP7.96□□□□□ -1.14
NELFE-213ENST00000494956 C21orf62Q9NYP8 219 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 TECRQ9NZ01 308 aaKnown RBP7.96□□□□□ -1.14
NELFE-213ENST00000494956 THYN1Q9P016 225 aa7.96□□□□□ -1.14
NELFE-213ENST00000494956 C3orf85A0A1B0GTC6 90 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 GABARAPH6UMI1 98 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 TPPPO94811 219 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 P0C879 139 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 C8orf88P0DMB2 117 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 IL18Q14116 193 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 Q56UQ5 140 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 CASC10Q5T4H9 136 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 STEAP1BQ6NZ63 245 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 HSD17B13Q7Z5P4 300 aaPredicted RBP7.95□□□□□ -1.14
NELFE-213ENST00000494956 ARRDC1Q8N5I2 433 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 OR2C3Q8N628 320 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 PINX1Q96BK5 328 aaKnown RBP7.95□□□□□ -1.14
NELFE-213ENST00000494956 DIRAS2Q96HU8 199 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 TMEM56Q96MV1 263 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 TSC22D3Q99576 134 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 HIPK2Q9H2X6 1198 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 EDA2RQ9HAV5 297 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 FAM212BQ9NTI7 297 aaPredicted RBP7.95□□□□□ -1.14
NELFE-213ENST00000494956 SLC2A8Q9NY64 477 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 CEPT1Q9Y6K0 416 aa7.95□□□□□ -1.14
NELFE-213ENST00000494956 HUWE1Q7Z6Z7 4374 aaKnown RBP7.94□□□□□ -1.14
NELFE-213ENST00000494956 IGHV3-49A0A0A0MS15 119 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 A0A0B4J293 547 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 C3orf84H3BNL1 204 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 I3L2K1 104 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 ST8SIA3O43173 380 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 MT-CO2P00403 227 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 CTSGP08311 255 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 AKR1C2P52895 323 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 TAS2R19P59542 299 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 HSPE1P61604 102 aaKnown RBP7.94□□□□□ -1.14
NELFE-213ENST00000494956 PRCDQ00LT1 54 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 TRIM16LQ309B1 348 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 CADM3Q8N126 398 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 OR52B4Q8NGK2 314 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 OR4C16Q8NGL9 310 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 OR1P1Q8NH06 330 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 TERB2Q8NHR7 220 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 LHFPL5Q8TAF8 219 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 RAB2BQ8WUD1 216 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 SMIM4Q8WVI0 70 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 TMEM190Q8WZ59 177 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 BSCL2Q96G97 398 aaPredicted RBP7.94□□□□□ -1.14
NELFE-213ENST00000494956 ZNF486Q96H40 463 aaPredicted RBP7.94□□□□□ -1.14
NELFE-213ENST00000494956 SPATA25Q9BR10 227 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 RTBDNQ9BSG5 229 aaPredicted RBP7.94□□□□□ -1.14
NELFE-213ENST00000494956 C6orf62Q9GZU0 229 aaPredicted RBP7.94□□□□□ -1.14
NELFE-213ENST00000494956 PALMDQ9NP74 551 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 FKBP11Q9NYL4 201 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 PRR13Q9NZ81 148 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 COPZ2Q9P299 210 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 UBQLN2Q9UHD9 624 aa7.94□□□□□ -1.14
NELFE-213ENST00000494956 IGHV3OR16-13A0A075B7E8 117 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 460.3 ms