RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 TMEM140Q9NV12 185 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 ELF5Q9UKW6 265 aaPredicted RBP8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 APLNQ9ULZ1 77 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 F11RQ9Y624 299 aaKnown RBP8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 TRAV2A0A0B4J234 112 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 IGHV7-4-1A0A0J9YVY3 117 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 TRDV1A0A1B0GX56 115 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 TMEM235A6NFC5 223 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 C15orf61A6NNL5 157 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 GABARAPO95166 117 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 CA1P00915 261 aaPredicted RBP8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 OR13C7P0DN81 318 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 FCGR2CP31995 323 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 ERVK-16P61578 105 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 Q56UQ5 140 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 ZNF367Q7RTV3 350 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 NUDCD2Q8WVJ2 157 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 OR10C1Q96KK4 312 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 TMEM56Q96MV1 263 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 RNF2Q99496 336 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 RHPN1-AS1Q9BWJ2 59 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 CCL28Q9NRJ3 127 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 NDUFB11Q9NX14 153 aa8.05□□□□□ -1.12
SNRNP200-207ENST00000493271 TRAV14DV4A0A0A6YYC5 116 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 NOTOA8MTQ0 251 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 IGLL5B9A064 214 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 SULT1C2O00338 296 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 CHEK1O14757 476 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 NUPL2O15504 423 aaKnown RBP8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 TNFSF12O43508 249 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 PPYP01298 95 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 EIF4EP06730 217 aaKnown RBP8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 WT1-ASQ06250 92 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 BEST4Q8NFU0 473 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 OR10W1Q8NGF6 305 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 TXN2Q99757 166 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 GINS3Q9BRX5 216 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 CHRDL1Q9BU40 450 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 FUNDC2Q9BWH2 189 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 SLC5A7Q9GZV3 580 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 NDUFA4L2Q9NRX3 87 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 FKBP11Q9NYL4 201 aa8.04□□□□□ -1.12
SNRNP200-207ENST00000493271 TRAV10A0A0B4J240 114 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 TRAV3A0A0B4J244 114 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 TEX50A0A1B0GTY4 177 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 MARCH11A6NNE9 402 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 K7EIM0 57 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 CTSGP08311 255 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 MIFP14174 115 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 SCAND1P57086 179 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 AADACL3Q5VUY0 350 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 FAM90A2PQ658T7 463 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 TPRA1Q86W33 373 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 UBAC2Q8NBM4 344 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 OR1P1Q8NH06 330 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 YIPF6Q96EC8 236 aa8.03□□□□□ -1.12
SNRNP200-207ENST00000493271 FAT2Q9NYQ8 4349 aa8.02□□□□□ -1.12
SNRNP200-207ENST00000493271 A0A0A6YYH2 397 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 A6NJ64 397 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF207O43670 478 aaKnown RBP8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 SSX5O60225 188 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 SNAPC5O75971 98 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 TFPI2P48307 235 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 MFAP4P55083 255 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF124Q15973 351 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 PVRIGQ6DKI7 326 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 HOGA1Q86XE5 327 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 Q8NAQ8 132 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 GIMAP1Q8WWP7 306 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 GPHA2Q96T91 129 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 RNF126Q9BV68 326 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 NAA50Q9GZZ1 169 aaKnown RBP8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 PRNDQ9UKY0 176 aa8.02□□□□□ -1.13
SNRNP200-207ENST00000493271 DNAH2Q9P225 4427 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 PKHD1P08F94 4074 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 IGHV3OR16-8A0A075B7F1 116 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 XRCC3O43542 346 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 YIF1AO95070 293 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 P0DMU3 169 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 FAM231AP0DMU4 169 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 FAM231CP0DMU5 169 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 SPP1P10451 314 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 F2RP25116 425 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 FGF9P31371 208 aaPredicted RBP8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 CBX5P45973 191 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 C22orf42Q6IC83 251 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 ZNF818PQ6ZRF7 136 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 LINC00299Q6ZSB3 139 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 TCF24Q7RTU0 167 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 STHQ8IWL8 128 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 DUSP18Q8NEJ0 188 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 OR51H1Q8NH63 302 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
SNRNP200-207ENST00000493271 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms