RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 TBPP20226 339 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 PPP5CP53041 499 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 PIGPP57054 158 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 IZUMO4Q1ZYL8 232 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 TMEM229BQ8NBD8 167 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 OR4A16Q8NH70 328 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 SCARB1Q8WTV0 552 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 CITED4Q96RK1 184 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 ZNF436Q9C0F3 470 aaPredicted RBP13.55□□□□□ -0.24
PTPRU-207ENST00000492954 C21orf62Q9NYP8 219 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
PTPRU-207ENST00000492954 OR11H12B2RN74 326 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 F8W735 103 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-207ENST00000492954 SCAF4O95104 1147 aaKnown RBP13.54□□□□□ -0.24
PTPRU-207ENST00000492954 CD74P04233 296 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 UBAC2Q8NBM4 344 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 C15orf40Q8WUR7 153 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 BSCL2Q96G97 398 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-207ENST00000492954 ZNF486Q96H40 463 aaPredicted RBP13.54□□□□□ -0.24
PTPRU-207ENST00000492954 TP53RKQ96S44 253 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 UFC1Q9Y3C8 167 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 CEPT1Q9Y6K0 416 aa13.54□□□□□ -0.24
PTPRU-207ENST00000492954 RBMY1BA6NDE4 496 aaKnown RBP13.53□□□□□ -0.24
PTPRU-207ENST00000492954 RBMY1EA6NEQ0 496 aaKnown RBP13.53□□□□□ -0.24
PTPRU-207ENST00000492954 GABARAPH6UMI1 98 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 RAB3DO95716 219 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 RBMY1DP0C7P1 496 aaKnown RBP13.53□□□□□ -0.24
PTPRU-207ENST00000492954 C8orf88P0DMB2 117 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 TAS2R19P59542 299 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 SCGB2B2Q4G0G5 96 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 STEAP1BQ6NZ63 245 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 LINC00322Q6ZN03 302 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-207ENST00000492954 OR1L6Q8NGR2 347 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 OR1P1Q8NH06 330 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 TMEM190Q8WZ59 177 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 MARC2Q969Z3 335 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 CHRDL1Q9BU40 450 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 SRD5A3Q9H8P0 318 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 RETNQ9HD89 108 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 RYR3Q15413 4870 aa13.53□□□□□ -0.24
PTPRU-207ENST00000492954 IGKV1-5P01602 117 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
PTPRU-207ENST00000492954 PRCDQ00LT1 54 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 Q56UQ5 140 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 SPINK9Q5DT21 86 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 CASC10Q5T4H9 136 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 FAAP20Q6NZ36 180 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 OR2C3Q8N628 320 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 OR13C8Q8NGS7 320 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 TERB2Q8NHR7 220 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 RAB2BQ8WUD1 216 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 MISP3Q96FF7 219 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 EDA2RQ9HAV5 297 aa13.52□□□□□ -0.25
PTPRU-207ENST00000492954 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.25
PTPRU-207ENST00000492954 C3orf85A0A1B0GTC6 90 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 LYL1P12980 280 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 ADMP35318 185 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
PTPRU-207ENST00000492954 SP6Q3SY56 376 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 SLC16A13Q7RTY0 426 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 OR52B4Q8NGK2 314 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 ZFAND1Q8TCF1 268 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 MARCH1Q8TCQ1 289 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 ATP6V0BQ99437 205 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 CCDC59Q9P031 241 aaKnown RBP13.51□□□□□ -0.25
PTPRU-207ENST00000492954 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
PTPRU-207ENST00000492954 IGHV3OR16-8A0A075B7F1 116 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 I3L2K1 104 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 NDUFA4O00483 81 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 P0C879 139 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 AKR1C2P52895 323 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 MRPS10P82664 201 aaKnown RBP13.5□□□□□ -0.25
PTPRU-207ENST00000492954 CCDC71LQ8N9Z2 235 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 SMIM4Q8WVI0 70 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 ISOC1Q96CN7 298 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 C20orf24Q9BUV8 137 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 HIPK2Q9H2X6 1198 aa13.5□□□□□ -0.25
PTPRU-207ENST00000492954 DAZ1Q9NQZ3 744 aaKnown RBP13.5□□□□□ -0.25
PTPRU-207ENST00000492954 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 A0A0B4J293 547 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 ZNF207O43670 478 aaKnown RBP13.49□□□□□ -0.25
PTPRU-207ENST00000492954 IGHV3-48P01763 117 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 TMBIM6P55061 237 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 SSBP1Q04837 148 aaKnown RBP13.49□□□□□ -0.25
PTPRU-207ENST00000492954 TRIM16LQ309B1 348 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 RBPMS2Q6ZRY4 209 aaKnown RBP13.49□□□□□ -0.25
PTPRU-207ENST00000492954 DIRAS2Q96HU8 199 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 ZNF414Q96IQ9 312 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 FAM110AQ9BQ89 295 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
PTPRU-207ENST00000492954 ST8SIA3O43173 380 aa13.48□□□□□ -0.25
PTPRU-207ENST00000492954 MT-CO2P00403 227 aa13.48□□□□□ -0.25
PTPRU-207ENST00000492954 CTSDP07339 412 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-207ENST00000492954 CTSGP08311 255 aa13.48□□□□□ -0.25
PTPRU-207ENST00000492954 ERHP84090 104 aaKnown RBP13.48□□□□□ -0.25
PTPRU-207ENST00000492954 IL18Q14116 193 aa13.48□□□□□ -0.25
PTPRU-207ENST00000492954 MEF2DQ14814 521 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms