RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TGOLN2O43493 480 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 ZNF57Q68EA5 555 aaPredicted RBP13.2□□□□□ -0.3
SEC13-218ENST00000490283 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 ADAMTSL5Q6ZMM2 481 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 OR1P1Q8NH06 330 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
SEC13-218ENST00000490283 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 SMIM4Q8WVI0 70 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 THAP7Q9BT49 309 aaPredicted RBP13.2□□□□□ -0.3
SEC13-218ENST00000490283 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 PLEKHA3Q9HB20 300 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 GAR1Q9NY12 217 aaKnown RBP13.2□□□□□ -0.3
SEC13-218ENST00000490283 C21orf62Q9NYP8 219 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
SEC13-218ENST00000490283 TMEM213A2RRL7 107 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 ELLP55199 621 aaPredicted RBP13.19□□□□□ -0.3
SEC13-218ENST00000490283 ERHP84090 104 aaKnown RBP13.19□□□□□ -0.3
SEC13-218ENST00000490283 PRCDQ00LT1 54 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 Q56UQ5 140 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 SLC16A13Q7RTY0 426 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 UBAC2Q8NBM4 344 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 UXS1Q8NBZ7 420 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 OR4D10Q8NGI6 311 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 OR13C8Q8NGS7 320 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 CACNG8Q8WXS5 425 aa13.19□□□□□ -0.3
SEC13-218ENST00000490283 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 DBX1A6NMT0 343 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 CTDSPLO15194 276 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 CTSDP07339 412 aaPredicted RBP13.18□□□□□ -0.3
SEC13-218ENST00000490283 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 HSPE1P61604 102 aaKnown RBP13.18□□□□□ -0.3
SEC13-218ENST00000490283 MARCH1Q8TCQ1 289 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
SEC13-218ENST00000490283 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 TP53RKQ96S44 253 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 TM2D3Q9BRN9 247 aa13.18□□□□□ -0.3
SEC13-218ENST00000490283 MRPL27Q9P0M9 148 aaKnown RBP13.18□□□□□ -0.3
SEC13-218ENST00000490283 RSL24D1Q9UHA3 163 aaKnown RBP13.18□□□□□ -0.3
SEC13-218ENST00000490283 ZNF785A8K8V0 405 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 EDN2P20800 178 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 ANKRD55Q3KP44 614 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 TM4SF20Q53R12 229 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 UNQ9165/PRO28630Q6UXU0 137 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 RBPMS2Q6ZRY4 209 aaKnown RBP13.17□□□□□ -0.3
SEC13-218ENST00000490283 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 SCARB1Q8WTV0 552 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 ISOC1Q96CN7 298 aa13.17□□□□□ -0.3
SEC13-218ENST00000490283 WDR89Q96FK6 387 aaPredicted RBP13.17□□□□□ -0.3
SEC13-218ENST00000490283 ZNF436Q9C0F3 470 aaPredicted RBP13.17□□□□□ -0.3
SEC13-218ENST00000490283 TEX13DA0A0J9YY54 714 aaPredicted RBP13.16□□□□□ -0.3
SEC13-218ENST00000490283 H3BMQ9 156 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 C3orf84H3BNL1 204 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 K7EIM0 57 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 NDUFA4O00483 81 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 NUPL2O15504 423 aaKnown RBP13.16□□□□□ -0.3
SEC13-218ENST00000490283 IFNA17P01571 189 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 SNCAP37840 140 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 MFAP2P55001 183 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
SEC13-218ENST00000490283 FAAP20Q6NZ36 180 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 ZNF114Q8NC26 417 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 OR52B4Q8NGK2 314 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 PRRT1Q99946 306 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 ENY2Q9NPA8 101 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
SEC13-218ENST00000490283 MLXQ9UH92 298 aa13.16□□□□□ -0.3
SEC13-218ENST00000490283 TRAV25A0A0B4J276 109 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 IGKV1-5P01602 117 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 CD7P09564 240 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 UCP1P25874 307 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 MFAP4P55083 255 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
SEC13-218ENST00000490283 HAGHQ16775 308 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 SP6Q3SY56 376 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 MCFD2Q8NI22 146 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
SEC13-218ENST00000490283 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
SEC13-218ENST00000490283 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
SEC13-218ENST00000490283 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.318e-20■□□□□ 10
SEC13-218ENST00000490283 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 OR4C16Q8NGL9 310 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
SEC13-218ENST00000490283 TXN2Q99757 166 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 SLIRPQ9GZT3 109 aaKnown RBP13.14□□□□□ -0.31
SEC13-218ENST00000490283 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms