RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 LIMS4P0CW20 117 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 CALCBP10092 127 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 CXCL2P19875 107 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 DUTP33316 252 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RPL27AP46776 148 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR3A3P47888 321 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RPS11P62280 158 aaKnown RBP eCLIP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 CATR1Q13166 79 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 LRRC36Q1X8D7 754 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OGFRL1Q5TC84 451 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 LPCAT3Q6P1A2 487 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF329Q86UD4 541 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 NFE4Q86UQ8 179 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TPRA1Q86W33 373 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 NANOGP1Q8N7R0 232 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 Q8NAQ8 132 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR51L1Q8NGJ5 315 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR52B4Q8NGK2 314 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR1P1Q8NH06 330 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR52E5Q8NH55 327 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 OR1L1Q8NH94 360 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 CANT1Q8WVQ1 401 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TMED6Q8WW62 240 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 SRSF12Q8WXF0 261 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ODF3Q96PU9 254 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 GPER1Q99527 375 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ASCL2Q99929 193 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 NDUFAF3Q9BU61 184 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TMEM59Q9BXS4 323 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 ACOT13Q9NPJ3 140 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 TAS2R4Q9NYW5 299 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 SMPXQ9UHP9 88 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 POMPQ9Y244 141 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 WDR83OSQ9Y284 106 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 RBMX2Q9Y388 322 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 PAM16Q9Y3D7 125 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 AP4S1Q9Y587 144 aa1.98□□□□□ -2.09
DEPDC1-203ENST00000488146 STARD9Q9P2P6 4700 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 IGHV7-4-1A0A0J9YVY3 117 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 A0A1W2PP11 408 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 H3BSH0 61 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 MFNGO00587 321 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 GEMIN2O14893 280 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 SLC31A2O15432 143 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 CIDEAO60543 219 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 HPRT1P00492 218 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 TFF1P04155 84 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 HLA-GP17693 338 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 TBPP20226 339 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 GADD45AP24522 165 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 GNG10P50151 68 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 PAX9P55771 341 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 POLR2GP62487 172 aaKnown RBP eCLIP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 RHOGP84095 191 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 KLF9Q13886 244 aaPredicted RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 GLIPR1L1Q6UWM5 242 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 NRARPQ7Z6K4 114 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 S100A7AQ86SG5 101 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 TMEM256Q8N2U0 113 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 THAP8Q8NA92 274 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 BPIFCQ8NFQ6 507 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 OR1S2Q8NGQ3 325 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 C11orf45Q8TAV5 145 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 LSM10Q969L4 123 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 MND1Q9BWT6 205 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 YTHDF1Q9BYJ9 559 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 IL36RNQ9UBH0 155 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 ING4Q9UNL4 249 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 STRAPQ9Y3F4 350 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 PEX16Q9Y5Y5 336 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 TEX13DA0A0J9YY54 714 aaPredicted RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 RPS10-NUDT3A0A1W2PQS6 291 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 E5RGE8 158 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 UPK2O00526 184 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 FABP7O15540 132 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 CIB2O75838 187 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 FABP1P07148 127 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 HSMCR30P0CW71 290 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 SLC25A4P12235 298 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 RPS27P42677 84 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 CAMLGP49069 296 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 WNT4P56705 351 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 RAB25P57735 213 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 OR2B8PP59922 312 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 YPEL3P61236 119 aaPredicted RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 ADARB1P78563 741 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 MS4A2Q01362 244 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 SSBP1Q04837 148 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 PLGLAQ15195 96 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 PIGYQ3MUY2 71 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 ZNF600Q6ZNG1 722 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 LINC00612Q8N6U2 182 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 NRACQ8N912 160 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 GDPD1Q8N9F7 314 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 BCAS4Q8TDM0 211 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 C15orf40Q8WUR7 153 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 NARS2Q96I59 477 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 TMEM56Q96MV1 263 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
DEPDC1-203ENST00000488146 LPAR5Q9H1C0 372 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms