RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 A0A0B4J293 547 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 AP4M1O00189 453 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 WRBO00258 174 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 FCN1O00602 326 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 AMY1AP04745 511 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 CRYGBP07316 175 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 APELAP0DMC3 54 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 RPL23AP62750 156 aaKnown RBP11.26□□□□□ -0.61
USP11-207ENST00000478596 IAH1Q2TAA2 248 aaPredicted RBP11.26□□□□□ -0.61
USP11-207ENST00000478596 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 C9orf66Q5T8R8 295 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 OR1L8Q8NGR8 309 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
USP11-207ENST00000478596 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.26□□□□□ -0.61
USP11-207ENST00000478596 GSKIPQ9P0R6 139 aa11.26□□□□□ -0.61
USP11-207ENST00000478596 FOXA2Q9Y261 457 aaPredicted RBP11.26□□□□□ -0.61
USP11-207ENST00000478596 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 A0A1B0GU03 582 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 C7orf66A4D0T2 115 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 MYOD1P15172 320 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 SLC35B1P78383 322 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 NDPQ00604 133 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 NMSQ5H8A3 153 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 ZNF562Q6V9R5 426 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 C8orf86Q6ZUL3 223 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 OR5B3Q8NH48 314 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 LINC00527Q9UJ94 153 aa11.25□□□□□ -0.61
USP11-207ENST00000478596 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 IGHG2P01859 326 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 TRAPPC2P0DI81 140 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 TRAPPC2BP0DI82 140 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 S100A10P60903 97 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 TMEM267Q0VDI3 215 aaPredicted RBP11.24□□□□□ -0.61
USP11-207ENST00000478596 NOL4LQ96MY1 436 aaPredicted RBP11.24□□□□□ -0.61
USP11-207ENST00000478596 TM2D3Q9BRN9 247 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 GON7Q9BXV9 100 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 ZNF355PQ9NSJ1 428 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 TMEM14BQ9NUH8 114 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 CACFD1Q9UGQ2 172 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 WSB1Q9Y6I7 421 aa11.24□□□□□ -0.61
USP11-207ENST00000478596 A0A1W2PN81 502 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 MSGN1A6NI15 193 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 P0C879 139 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 CHRNA7P36544 502 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 LFNGQ8NES3 379 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 OR5M8Q8NGP6 311 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 ZNF257Q9Y2Q1 563 aa11.23□□□□□ -0.61
USP11-207ENST00000478596 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 PSMB11A5LHX3 300 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 HMX3A6NHT5 357 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 DBX1A6NMT0 343 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 MPTX1A8MV57 137 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 MED6O75586 246 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 SIX6O95475 246 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 REG1AP05451 166 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 SLC25A6P12236 298 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 SPCS3P61009 180 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 ZNF429Q86V71 674 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 CADM3Q8N126 398 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 STPG2Q8N412 459 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 ZBTB8BQ8NAP8 495 aaPredicted RBP11.22□□□□□ -0.61
USP11-207ENST00000478596 ZFP57Q9NU63 452 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 FBXO7Q9Y3I1 522 aa11.22□□□□□ -0.61
USP11-207ENST00000478596 HECTD4Q9Y4D8 3996 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 LINC01548A6NM66 108 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 NUDT19A8MXV4 375 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 DEFA4P12838 97 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 NKX2-1P43699 371 aaPredicted RBP11.21□□□□□ -0.61
USP11-207ENST00000478596 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
USP11-207ENST00000478596 RRAS2P62070 204 aaPredicted RBP11.21□□□□□ -0.61
USP11-207ENST00000478596 TNFRSF9Q07011 255 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 Q6ZRM9 215 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 C2orf50Q96LR7 162 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 MAGT1Q9H0U3 335 aa11.21□□□□□ -0.61
USP11-207ENST00000478596 HEYLQ9NQ87 328 aaPredicted RBP11.21□□□□□ -0.61
USP11-207ENST00000478596 PAIP2BQ9ULR5 123 aaKnown RBP11.21□□□□□ -0.61
USP11-207ENST00000478596 LSM5Q9Y4Y9 91 aaKnown RBP11.21□□□□□ -0.61
USP11-207ENST00000478596 G3V318 75 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 L7N2F9 121 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 CYB5BO43169 146 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 SSSCA1O60232 199 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 IGF1P05019 195 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 OR13C7P0DN81 318 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 IAPPP10997 89 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 AREGP15514 252 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 SNCAP37840 140 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 VAMP2P63027 116 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 SSBP2P81877 361 aaPredicted RBP11.2□□□□□ -0.62
USP11-207ENST00000478596 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
USP11-207ENST00000478596 FCN2Q15485 313 aa11.2□□□□□ -0.62
USP11-207ENST00000478596 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms