RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LYSMD1Q96S90 227 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 NMNAT3Q96T66 252 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 SERPINI1Q99574 410 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 HSPB9Q9BQS6 159 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 EFCAB11Q9BUY7 163 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 CCDC90BQ9GZT6 254 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 GPR84Q9NQS5 396 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 JPT1Q9UK76 154 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 DNAJC12Q9UKB3 198 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 COQ4Q9Y3A0 265 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 HSPE1-MOB4S4R3N1 261 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 MIA2Q96PC5 1412 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 SMARCA4P51532 1647 aa1.99□□□□□ -2.09
SMNDC1-205ENST00000477763 ERCC6L2Q5T890 1561 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 PTPRJQ12913 1337 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 C17orf98A8MV24 154 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 GSTZ1O43708 216 aaPredicted RBP1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 RBP1P09455 135 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 AKR1C3P42330 323 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 DAPP51397 102 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 RPS28P62857 69 aaKnown RBP1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 GRK1Q15835 563 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 ZNF181Q2M3W8 571 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 SMIM21Q3B7S5 101 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 SCGB2B2Q4G0G5 96 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 GLT8D1Q68CQ7 371 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 CLVS1Q8IUQ0 354 aaPredicted RBP1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 BAP18Q8IXM2 172 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 C1orf174Q8IYL3 243 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 ST6GALNAC3Q8NDV1 305 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 OR9Q1Q8NGQ5 310 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 OR5C1Q8NGR4 320 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 OR13C8Q8NGS7 320 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 KLK6Q92876 244 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 CAPZA3Q96KX2 299 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 PFDN5Q99471 154 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 CCDC32Q9BV29 185 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 CXorf21Q9HAI6 301 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 TPT1P8Q9HAU6 139 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 MED29Q9NX70 200 aa1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 MRPS16Q9Y3D3 137 aaKnown RBP1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 DENND4BO75064 1496 aaPredicted RBP1.98□□□□□ -2.09
SMNDC1-205ENST00000477763 FANCD2Q9BXW9 1451 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 WDR7Q9Y4E6 1490 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 TRBV19A0A075B6N1 114 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 BORCS7-ASMTA0A0B4J1R7 106 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 LOC102725191A0A1B0GVB3 256 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 TMEM269A0A1B0GVZ9 245 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 RFPL4AA6NLU0 287 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 MIF4GDA9UHW6 222 aaKnown RBP1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 RFPL4AL1F8VTS6 287 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 LST1O00453 97 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 COX7A2LO14548 114 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 CST8O60676 142 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 SULT1C4O75897 302 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 IFNA7P01567 189 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 BPGMP07738 259 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 CD7P09564 240 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 SMIM10L2AP0DMW4 78 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 SMIM10L2BP0DMW5 78 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 CSRP1P21291 193 aaKnown RBP1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 RPS4Y1P22090 263 aaKnown RBP1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 SDC4P31431 198 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 FGF12P61328 243 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 BSPH1Q075Z2 132 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 PDGFRLQ15198 375 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 SDIM1Q6ZPB5 146 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 Q6ZS49 121 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 ZFAND2AQ8N6M9 145 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 NUP35Q8NFH5 326 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 OR8J3Q8NGG0 315 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 OR4D11Q8NGI4 311 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 THEM6Q8WUY1 208 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 SLC7A6Q92536 515 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 CCDC115Q96NT0 180 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 FBXL12Q9NXK8 326 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 TVP23BQ9NYZ1 205 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 LAMTOR3Q9UHA4 124 aa1.97□□□□□ -2.09
SMNDC1-205ENST00000477763 NUP205Q92621 2012 aa1.96□□□□□ -2.09
SMNDC1-205ENST00000477763 GAPVD1Q14C86 1478 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 A0A087WX48 190 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 TRAV4A0A0B4J268 109 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 A0A1B0GW54 56 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 A0A1B0GX51 115 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 LINC00862A6NCI5 91 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 RIIAD1A6NNX1 92 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 A8MUN3 132 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 K7EP13 123 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 DEGS1O15121 323 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 SMIM24O75264 130 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 FAM107AO95990 144 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 PPP1CCP36873 323 aaKnown RBP1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 PSMD8P48556 350 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 DEFA1P59665 94 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 TBPL1P62380 186 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 FKBP1AP62942 108 aaKnown RBP1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 DEFA6Q01524 100 aa1.96□□□□□ -2.1
SMNDC1-205ENST00000477763 HTR4Q13639 388 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms