RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 C12orf54Q6X4T0 127 aa12.02□□□□□ -0.49
SAMM50-203ENST00000474323 GGNQ86UU5 652 aa12.02□□□□□ -0.49
SAMM50-203ENST00000474323 GALMQ96C23 342 aa12.02□□□□□ -0.49
SAMM50-203ENST00000474323 NCKAP5O14513 1909 aa12.02□□□□□ -0.49
SAMM50-203ENST00000474323 USF3Q68DE3 2245 aa12.02□□□□□ -0.49
SAMM50-203ENST00000474323 PRRC2CQ9Y520 2896 aaKnown RBP12.02□□□□□ -0.49
SAMM50-203ENST00000474323 C3orf80F5H4A9 247 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 USF1P22415 310 aaPredicted RBP12.01□□□□□ -0.49
SAMM50-203ENST00000474323 FXYD3Q14802 87 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 FAM71F2Q6NXP2 309 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 VHLLQ6RSH7 139 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 WASHC3Q9Y3C0 194 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
SAMM50-203ENST00000474323 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 URB1O60287 2271 aaKnown RBP12.01□□□□□ -0.49
SAMM50-203ENST00000474323 GAGE12BA1L429 117 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 PRSS46E5RG02 174 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 NUDT3O95989 172 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 CYB561P49447 251 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 SLAQ13239 276 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 IBA57Q5T440 356 aaKnown RBP12.01□□□□□ -0.49
SAMM50-203ENST00000474323 AMMECR1LQ6DCA0 310 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 SPACA3Q8IXA5 215 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 Q8IYB0 196 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 SAP30LQ9HAJ7 183 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 NPVFQ9HCQ7 196 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
SAMM50-203ENST00000474323 OR2T8A6NH00 312 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 M0R1X1 148 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 FOXH1O75593 365 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 NGFP01138 241 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 CRYBB3P26998 211 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 IGFBP7Q16270 282 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 ATP1A1-AS1Q5TC04 95 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 SPINK14Q6IE38 97 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 WFDC12Q8WWY7 111 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 TMEM70Q9BUB7 260 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 PRRG4Q9BZD6 226 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 C1RLQ9NZP8 487 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 CGAP01215 116 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 SPATA31B1PQ5VZV4 182 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 ERASQ7Z444 233 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 TNFRSF14Q92956 283 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 TMEM45BQ96B21 275 aa12□□□□□ -0.49
SAMM50-203ENST00000474323 TECRQ9NZ01 308 aaKnown RBP12□□□□□ -0.49
SAMM50-203ENST00000474323 FAM90A9PA6NNJ1 464 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 CRXO43186 299 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 ZNHIT1O43257 154 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 REG1BP48304 166 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 ARF1P84077 181 aaKnown RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 YRDCQ86U90 279 aaKnown RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 OR10D3Q8NH80 312 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 SSMEM1Q8WWF3 244 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 COL25A1Q9BXS0 654 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 TNFRSF19Q9NS68 423 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 SLC25A10Q9UBX3 287 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 CD5LO43866 347 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 RFPL3SP0C7P2 107 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 SPINK2P20155 84 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 NPY1RP25929 384 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 S100A7P31151 101 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 NBL1P41271 181 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 ABHD17BQ5VST6 288 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 LINC00696Q6ZRV3 163 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 OR52E5Q8NH55 327 aa11.99□□□□□ -0.49
SAMM50-203ENST00000474323 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-203ENST00000474323 CFAP47Q6ZTR5 3102 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 IGHV3-9P01782 118 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 OR9G9P0C7N8 305 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 RAB31Q13636 194 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 ZNF146Q15072 292 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 OR52L2PQ8NGH6 319 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 C1orf159Q96HA4 380 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 SERTAD4Q9NUC0 356 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 PTPRBP23467 1997 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 A0A096LPE4 126 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 A0A1W2PPZ6 126 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 PINLYPA6NC86 204 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 OR4C46A6NHA9 309 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 CORTO00230 105 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 SSTR5P35346 364 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 VDAC2P45880 294 aaPredicted RBP11.98□□□□□ -0.49
SAMM50-203ENST00000474323 ERVK11-1P61568 191 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 ARF6P62330 175 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 FAM162BQ5T6X4 162 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 TRAT1Q6PIZ9 186 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 TEPPQ6URK8 271 aa11.98□□□□□ -0.49
SAMM50-203ENST00000474323 AKAP13Q12802 2813 aa11.97□□□□□ -0.49
SAMM50-203ENST00000474323 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
SAMM50-203ENST00000474323 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
SAMM50-203ENST00000474323 TMEM30CPA0ZSE6 113 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms