RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 J3QL48 77 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 UPK2O00526 184 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 SLC22A5O76082 557 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 NUDT3O95989 172 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 CD74P04233 296 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 FCER2P06734 321 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 CTSGP08311 255 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 HSMCR30P0CW71 290 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 RASSF2P50749 326 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 MFAP4P55083 255 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 FXYD4P59646 89 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 ERVK-16P61578 105 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 WT1-ASQ06250 92 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 RNF212Q495C1 297 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 PSMG4Q5JS54 123 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 IQCF2Q8IXL9 164 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 MS4A15Q8N5U1 240 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 ZNF485Q8NCK3 441 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 BPIFB6Q8NFQ5 453 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 ZNF414Q96IQ9 312 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 C18orf15Q96N68 181 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 YTHDF1Q9BYJ9 559 aaKnown RBP4.91□□□□□ -1.62
HDAC1-204ENST00000471488 ATG5Q9H1Y0 275 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 CCL28Q9NRJ3 127 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 BET1LQ9NYM9 111 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 RAB22AQ9UL26 194 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 KCNK7Q9Y2U2 307 aa4.91□□□□□ -1.62
HDAC1-204ENST00000471488 F11RQ9Y624 299 aaKnown RBP4.91□□□□□ -1.62
HDAC1-204ENST00000471488 NBDYA0A0U1RRE5 68 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 K7EIM0 57 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 HLA-DQB1P01920 261 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 NQO2P16083 231 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 HIST1H1DP16402 221 aaKnown RBP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 FUSP35637 526 aaKnown RBP eCLIP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 BRWD1-AS2P59051 145 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 ARPC4P59998 168 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 CATR1Q13166 79 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 DHRS2Q13268 280 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 AADACL3Q5VUY0 350 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 FAM90A2PQ658T7 463 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 TOMM20LQ6UXN7 152 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 GSG1LQ6UXU4 331 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 ZNF66Q6ZN08 573 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 OR1L8Q8NGR8 309 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 FRZBQ92765 325 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 LSM10Q969L4 123 aaKnown RBP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 DGCR14Q96DF8 476 aaKnown RBP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 NARS2Q96I59 477 aaKnown RBP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 GFI1Q99684 422 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 NIPSNAP3BQ9BS92 247 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 CENPOQ9BU64 300 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 C1QTNF4Q9BXJ3 329 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM231Q9H6L2 316 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 OR51B2Q9Y5P1 312 aa4.9□□□□□ -1.63
HDAC1-204ENST00000471488 PUS1Q9Y606 427 aaKnown RBP eCLIP4.9□□□□□ -1.63
HDAC1-204ENST00000471488 AGRNO00468 2067 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 METTL21EPA6NDL7 271 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 MFNGO00587 321 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 SNAPC5O75971 98 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 DIRAS3O95661 229 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 MT-CO2P00403 227 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 HPRT1P00492 218 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 IGLV2-14P01704 120 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 CD5P06127 495 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 UCHL1P09936 223 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 CTXN2P0C2S0 81 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 PTHLHP12272 177 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 NPPCP23582 126 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 FCGR2CP31995 323 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 TAS2R31P59538 309 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 DAD1P61803 113 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 IRF3Q14653 427 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 KLK9Q2XQG4 91 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 CDNFQ49AH0 187 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 Q5VSD8 79 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 ZNF773Q6PK81 442 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 TPRA1Q86W33 373 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM17Q86X19 198 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 NANOGP1Q8N7R0 232 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 NUDCD2Q8WVJ2 157 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 UFD1Q92890 307 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM230Q96A57 120 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 OR10C1Q96KK4 312 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 TMEM56Q96MV1 263 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 RAB40CQ96S21 281 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 C7orf50Q9BRJ6 194 aaKnown RBP4.89□□□□□ -1.63
HDAC1-204ENST00000471488 SRSF8Q9BRL6 282 aaKnown RBP4.89□□□□□ -1.63
HDAC1-204ENST00000471488 MND1Q9BWT6 205 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 SLC5A7Q9GZV3 580 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 NXF2Q9GZY0 626 aaKnown RBP4.89□□□□□ -1.63
HDAC1-204ENST00000471488 PTTG2Q9NZH5 202 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 KLK9Q9UKQ9 250 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 V9GY05 133 aa4.89□□□□□ -1.63
HDAC1-204ENST00000471488 APOBP04114 4563 aaKnown RBP4.88□□□□□ -1.63
HDAC1-204ENST00000471488 SMIM30A4D0T7 59 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 HELTA6NFD8 242 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 ERICH4A6NGS2 130 aa4.88□□□□□ -1.63
HDAC1-204ENST00000471488 PTGES3LE9PB15 166 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms